Paraburkholderia kirstenboschensis: RW095_11520
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Entry
RW095_11520 CDS
T09457
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RW095_11520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkf02000
]
RW095_11520
Transporters [BR:
pkf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RW095_11520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
WOD16522
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All DBs
Position
2:630282..631328
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AA seq
348 aa
AA seq
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MKLFRTIAALAAVCAFGAAAPAWSQTKTIYIGMNGGPMEKAYTSQVLPDFEKANNVKVVV
VPGTSSDILAKLLANKASPQIHVVFLDDGVMARAISMGVCKKLDDSPVLKELYPFARMKD
DMGAGVQLGMTGIAYNKKLFAEKGWAPPTSWMDFADPKYKGKVVFQSASSSTFGLHGFLA
INRLMGGTEQNVEPGFTKWASTVGPNVVEYVPNSAKISEMVQTGEAGLFPLTPTAVGDLA
DKGIPVGYVNPKEGPVLLLVDLCVVNNSPDPQLAQKLAQFLLSAPAQTKAAEAGRQIPTN
RLAKMTPPMQQSLGNVEDLVRKVTVVDWDTINAHRAQWDTRWNRQIER
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgttcaggacgatcgcggcactggccgcagtgtgtgcattcggcgcggcagca
cccgcatggtcgcagacgaagacgatctacatcggcatgaacggcggtccgatggaaaag
gcgtatacgagccaggtgctgcccgacttcgagaaagcgaacaatgtgaaagtagtcgtg
gtgccgggcacgtcgtcggatattctcgcgaagctgctcgcaaacaaggcgagtccgcag
attcacgtggtgtttctcgacgacggcgtgatggcgcgcgccatcagcatgggcgtgtgc
aaaaaacttgacgactcgccggtgctcaaggagctctatccgttcgcgcgcatgaaggac
gacatgggcgcgggcgtgcagctcggcatgaccggtattgcgtacaacaagaagctgttc
gctgaaaagggctgggcgccgcctacgtcatggatggatttcgccgatccgaaatacaag
ggcaaggtggtgttccagtccgcttcgagcagcacgttcggcctgcacggctttctcgcg
atcaaccgtttgatgggcggcaccgagcagaacgtcgaaccgggcttcacgaaatgggcg
agcacggttggccccaacgtcgtcgagtatgtgccgaactcggcgaagatttcggaaatg
gtgcaaaccggcgaggccggcctctttccgctgacgccgaccgccgtcggcgatctggcc
gacaagggcattccggtcggctacgtgaatccgaaagaagggccagtgctgctgctcgtg
gatctgtgcgtggtcaacaacagccccgatccgcaacttgcacaaaagctcgcgcagttc
ctgctgtcagcgccggcgcagacgaaagccgctgaagcaggccgccagattccgaccaac
cgtctcgcgaaaatgacgccgccgatgcagcaaagcctcggcaacgtggaagacctcgtg
cgcaaagtcacggtggtggattgggacactatcaatgcgcatcgtgcgcaatgggacacg
cgctggaaccgccagatcgaacgctag
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