Paraburkholderia kirstenboschensis: RW095_13180
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Entry
RW095_13180 CDS
T09457
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf00100
Steroid biosynthesis
pkf00909
Sesquiterpenoid and triterpenoid biosynthesis
pkf01100
Metabolic pathways
pkf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
RW095_13180
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
RW095_13180
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pkf01006
]
RW095_13180
Enzymes [BR:
pkf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
RW095_13180
Prenyltransferases [BR:
pkf01006
]
Terpene biosynthesis
Squalene/phytoene synthase
RW095_13180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
WOD16820
LinkDB
All DBs
Position
2:complement(1001031..1002077)
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AA seq
348 aa
AA seq
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MPNPTRAFLLGPLLKGVSRSFYLTLRVLPVGMRDPIGLAYLLARAADTIADTSLVAPEQR
LQLLLALRDQVNGVASDGALFQRMAAEVAGQQSQSDEKVLLESLGPALDILAQLNESDRK
AVRGIVSTLTEGMEFDLRTFPDERSGRIAALREYPELDRYTYLVAGCVGEFWTTMTYAHM
PGTLKERPETMASRGVRFGKALQMTNVLRDCGKDLRIGRCYLPQTLLDRHGLSPQDLLLP
ANSLRARPLMIELLRTTLDHFREALDYTLAIPAFSVRLRLACLWPILIGLETLLLLVDNE
AWLDPQKVSKVRRSTVYRIIASSLLLVGSNALVRQSIEQRIRQIEARF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatccgacccgggcttttcttctcggcccgctcctgaaaggcgtttcacgctcg
ttttaccttacgctgcgcgtgctgccagtgggaatgcgcgacccgatcggcctcgcctat
ctgctcgcgcgtgccgccgacacgatcgcggatacatcgctggtggcgccggagcaacgc
cttcagttactgctggcgttgcgcgaccaggtcaacggtgtagcgagcgacggtgcactg
ttccagcgcatggccgcggaagtcgcgggccagcagagtcagtcggacgagaaggtgctg
ctggaatcgctcggtcccgcgctcgacatactggcccagttaaatgaatcggatcgcaag
gccgtgcgcggtatcgtttctacgctgaccgagggcatggagttcgatttgcgcacgttc
cccgacgaacgttcgggccgcatcgcggcgttgcgcgaatatccggagttggaccgctat
acgtatctcgtcgcgggctgcgtcggcgaattctggaccacaatgacctacgcgcatatg
ccaggcacgctgaaagagcggcccgagacaatggcgagtcgtggcgttcgattcggcaag
gcgctgcaaatgaccaacgtattgcgcgattgcggaaaggacttgcgtatcggccgctgc
tatcttccgcaaacattgctggatcgacacggcttgagtccacaagacctattgttgccg
gccaattcgctgcgtgcgcgtccgctgatgatcgagctgttgcgcacaacgctcgatcat
ttccgtgaagcgctcgactacacgctcgccattcccgcgttttccgtgcgcttgcggctt
gcgtgtttgtggccgattctgatcggcctcgaaacgctgctgctgctcgtggataacgaa
gcgtggctcgatccgcaaaaagtgtcgaaggtgcgaaggagcacggtgtatcgaatcatt
gcgtcgtcgctgctgctggtcggctcgaatgcgctggtgcgtcagtcgatagagcagcgc
atccggcagatagaagcgcggttttga
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