Paraburkholderia kirstenboschensis: RW095_13235
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Entry
RW095_13235 CDS
T09457
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf02010
ABC transporters
pkf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RW095_13235
03070 Bacterial secretion system
RW095_13235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkf02000
]
RW095_13235
02044 Secretion system [BR:
pkf02044
]
RW095_13235
Transporters [BR:
pkf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RW095_13235
Secretion system [BR:
pkf02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RW095_13235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
cNMP_binding
ABC_tran
SMC_N
AAA_22
AAA_25
nSTAND3
AAA_29
NB-ARC
Guanylate_cyc_2
AAA_23
MobB
NACHT
AAA_15
DUF87
Motif
Other DBs
NCBI-ProteinID:
WOD16830
LinkDB
All DBs
Position
2:complement(1010575..1013631)
Genome browser
AA seq
1018 aa
AA seq
DB search
MDAPQTAPSAAEFLASVEILSPFSRDEIDRLAEYAQARFYSFGETVCSAGETADGLYVIR
SGSVRIFVEENGKETSMGVRKSGEIFADIAMLRTYVHEASVRASAKTELLFIPRAAIEPV
ITGNQAALAFVASYVAINSAGGFVAQLFDLRGKLNKAELEEYVRSVGVKRVAAGKEILKQ
EARDDRRLYVVRQGEVRIVRHEEGRDYTLAALGEGEIFGEKACLMRQEQMASAVASTDAR
LLVIPERTVHFILERNPKLREVLDERIRYVDRELQRQKRLEQRRKLPLMLDLQSKPEFGE
KVIKRFALVEQAEEMDCGAACLAMICRHYSIPMTLGKLRELANVTTQGATLDSLARAGES
LGFTARGVQCTFDSLRGFDLPFIVHWEGYHYVVVYGLSTEYVWVADPALGFRKLTVEDFE
RGWSGTCLLFTGGPHLLQMSAARSPWIRFVGYLKPYRKILGHLFLATFVIQVLGVIPPLI
IQNILDGVIVHQNVSLLHLLIGGLIISNVFSQLMSSIRAYLANFMVRNMDFAMMSQFFKH
TLSLPFSFFAKRKTGDIFARFQENQTIRAFLTESTVTTALNLLMVFIYFTIMFVYNVKMT
LVLIGFVIPIMALTALATPRIKNYAREVFTASTESKSFLMEALAGVETVKGMGIERPVRL
RWEKKYAKALEVQYRAHAFNILVGLGSQLLNAATTIAILWVGANLVLAREMTIGQLIAFN
AFMGSVLGPLMGLVGLWSMLNDAGVAMERLGDVLDIEPEQRPQDLPSRVMLPELQGEISL
SGVYFRYGDDDAAYVLENISFDIKPGELVAIVGRSGSGKTTLAKLLVGFYTPTEGKMSID
GYDIGVVDKAYFRAQIGYVMQSNLLFSGTIAENIASGDDAPDRRRIEEVARMADAHAFIS
KMPLGYEQIVGERGIGLSGGQIQRLCIARALYHDPRLLVFDEATSALDSQSESNILGNMH
DILKGRTAVIIAHRLSTIMRADKILVLYEGAIVEQGRHEELIQRGGMYYQLVQKQLST
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaccccagaccgcaccatccgccgccgagtttctcgcctcggtggaaatactg
tcgcctttttctcgcgatgagatcgaccgcctggctgaatatgcacaggcgcgcttttat
tcgtttggcgaaacggtgtgttcggcaggggagaccgccgacggtttatacgtgattcgt
tcgggctcggtgcgcatctttgtcgaggagaacggcaaggaaacgagcatgggagtgcgc
aagtcgggagaaatcttcgccgatattgcgatgctccgtacgtatgtgcatgaagcctcg
gtgcgggcgtcggcgaagacggagttgctgttcatcccgcgcgccgcaatcgagccggtg
atcaccggcaatcaggcagcactcgcttttgtcgcgagctatgtggcgatcaattcggcc
ggcggctttgtcgcacagttgttcgatttgcgcggcaaactgaacaaggccgagcttgaa
gaatacgtacgcagcgtgggtgtgaaacgtgtggccgcaggcaaggagattctcaagcag
gaagcacgcgacgaccggcgcttatacgtggtgcgtcagggcgaagtgcgcatcgttcgg
catgaagaagggcgcgactatacgctcgccgcgctcggcgaaggcgaaatattcggcgag
aaagcgtgcttgatgcgccaggaacaaatggcctccgcggttgcttcgacagatgcccgg
ctgctggttattcccgagcgcacggttcatttcattcttgagcgcaatcccaaactgcgc
gaggtactggacgaacgcattcgttacgtcgaccgtgaattacagcggcagaagcggctt
gagcaacgccgtaagttgccgctgatgctggacctgcagagcaagcccgagttcggcgaa
aaggtaatcaagcgctttgcgctggtcgaacaggccgaagaaatggattgcggcgcggca
tgcctcgccatgatctgccgtcactacagcattccgatgacgctcggcaaattgcgcgaa
ctcgccaatgtgacgacgcagggcgcgacgctcgacagccttgcccgtgcgggcgaatcg
ctcggcttcaccgcgcgtggcgtgcaatgcacgttcgattcgttacgtggattcgatcta
ccgttcatcgtgcattgggagggctaccactatgtggtggtgtatgggctctccactgag
tacgtatgggtcgcggacccggcgctgggcttccgcaaactgaccgtggaggatttcgag
cgcggctggagcggtacttgtctgctgttcacgggcggccctcacttgctgcaaatgtcg
gcggcgcgttcgccgtggatacgctttgtaggctacctgaagccgtacagaaagattctg
gggcacctctttctcgcgacgtttgtgattcaggtactcggcgtgatcccgccgctcatc
atccagaacattcttgacggcgtaatcgtgcatcagaatgtgagcttgctgcatctgctg
ataggcggcctcattatttcgaatgtgttctcgcaactcatgtcgtcgattcgcgcctac
ctcgccaatttcatggtgcgcaacatggacttcgcgatgatgtcgcagttcttcaagcac
acgttgtcgctgccgttctcgttttttgcaaagcgtaaaactggcgacatttttgcgcgt
tttcaggaaaaccaaacgattcgcgcatttctcacggaatccaccgtgacgacagcattg
aatctgctgatggtgttcatctacttcacgatcatgttcgtctacaacgtgaagatgacg
ctcgtgctgatcggctttgtcattcctatcatggcgctgaccgcgttggccacccccaga
atcaagaattatgcgcgtgaggttttcaccgcgtcgacagaatcgaagtcgttcctgatg
gaagcactggccggcgtcgaaacggtcaaaggcatgggcatcgagcggcccgtccgtttg
cgctgggagaagaaatacgcgaaagcgctggaagtgcagtaccgtgcgcacgctttcaat
attctcgttgggctcggcagtcaattgctgaacgctgcgaccacgatcgcgattctgtgg
gtcggcgcgaatctcgtgctcgcgcgcgagatgacaatcggccagttgattgcattcaat
gcattcatgggaagcgtgctcggccccttgatgggactcgtcggcttatggagcatgctt
aatgacgcgggcgtcgcgatggagcgccttggcgatgtgctcgacatcgagccggaacag
aggccgcaggatttgccgtcacgcgtaatgttgcccgaactgcagggcgaaattagcctg
agcggtgtctacttccgctacggcgatgacgatgccgcttatgtgttggagaacatcagt
ttcgacatcaagccgggcgaactggtggcgattgtcggacgcagcggctccggcaaaacg
acgttagccaagttgcttgtcggcttttacacgccgaccgagggcaagatgtcgattgac
ggttacgacatcggcgtggtcgacaaagcgtatttccgcgcacagatcggctatgtgatg
caaagcaatctgctgttctcgggcacgattgccgagaacatagcaagcggcgacgacgca
ccggaccgccgccgcatcgaggaagtcgccagaatggcggatgcacacgcgtttatcagc
aagatgccgctcggctacgagcagattgtcggcgaacgcggaatagggttgtctggcggt
cagatccagcggctgtgcattgcacgcgcgctatatcacgatccacgcctgctggtattc
gacgaagccacgtctgcgctcgattcgcagtcggagagcaacattctcggcaatatgcac
gacattctgaagggccgcaccgcagtgatcatcgcgcatcggctgagcacgatcatgcgt
gccgacaagatcctcgtgctctatgaaggggcaatcgtcgaacagggccgtcatgaagaa
ctgatccagcgcggtggcatgtactaccaactggttcagaaacaactgagtacgtga
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