KEGG   Paraburkholderia kirstenboschensis: RW095_16375
Entry
RW095_16375       CDS       T09457                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pkf  Paraburkholderia kirstenboschensis
Pathway
pkf03030  DNA replication
pkf03410  Base excision repair
pkf03420  Nucleotide excision repair
pkf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pkf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RW095_16375 (polA)
   03410 Base excision repair
    RW095_16375 (polA)
   03420 Nucleotide excision repair
    RW095_16375 (polA)
   03440 Homologous recombination
    RW095_16375 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pkf03032]
    RW095_16375 (polA)
   03400 DNA repair and recombination proteins [BR:pkf03400]
    RW095_16375 (polA)
Enzymes [BR:pkf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RW095_16375 (polA)
DNA replication proteins [BR:pkf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     RW095_16375 (polA)
DNA repair and recombination proteins [BR:pkf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     RW095_16375 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RW095_16375 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: WOD14922
UniProt: A0ABZ0ECJ4
LinkDB
Position
2:1687842..1690583
AA seq 913 aa
MPEERSLEGKTLLLVDGSSYLYRAYHAMPDLRGPDGGPTGALYGMISMLRRMRKEVTAEY
SACVFDAKGKTFRDDWYPDYKANRPSMPDDLSRQIEPIHVAVRALGWPLLMIDGVEADDV
IGTLSTEAEKRGMNVIVSTGDKDLAQLVSDHVTLINTMTNEKLDRAGVLAKFGVPPERIV
DYLSLIGDTVDNVPGVEKCGPKTALKWLSQFESLDGIVAHADEIKGAVGDNLRRALDFLP
MARKLVTVERHCDLTGHLTSIEENLQSRPESREELRDVFTRHGFKTWLREVEIADAVEGP
ETDVPPALSVDHERHYETVQTWEQFDAWLQKVNAAELTSFDTETTSLDPMIAQIVGLSLS
VEAGHAAYVPLAHRGPDAPLQLPRDEVLSRLKPWLESAEHKKVGQHLKYDEQVLANYGIE
MHGVEHDTLLQSYVLESHRPHDMDNLALRHLGIKTIKYEDVAGKGAQQIGFDEVALDKAA
EYAAEDADVTLRLHQALYPQLAAEQALQHVYRDIEVPTSRVLRKMERTGVLIDAEKLRQQ
SSEIAARLIQLESEAYVLAGGEFNLGSPKQIGQIFFERLELPVVKKTPSGAPSTDEEVLQ
KLAEDYPLPKILLEHRGLSKLKSTYTDKLPRMVNATTGRVHTNYAQAVAVTGRLASNDPN
LQNIPVRTGEGRRIREAFIAPPGHKLVSADYSQIELRIMAHISGDESLLRAFSQGEDIHR
ATASEIFSVTPLEVSNDQRRVAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRYFARY
PGVARYMDETRLSAKAKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADL
IKLSMIAVQKWIEQSKIGTRMIMQVHDELILEVPDAELSEVRQRLPELMCGVAALKVPLV
AEVGAGLNWEEAH
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgcctgaagaacgaagccttgaaggtaagaccctgctattggtcgacggttcgagttat
ctgtaccgggcctaccatgcgatgcctgatctgcgcgggcccgatggtggtcccacaggt
gcgctctacgggatgatcagcatgctgcggcgcatgcgcaaggaagtcacagcagagtat
agcgcgtgcgtgttcgacgccaagggcaaaacgtttcgcgacgactggtatccggactat
aaggcgaatcgtccctccatgccggacgatctctcgcggcaaatcgagccaattcatgtg
gccgtgcgcgcgctcggctggccgcttctgatgatcgacggcgtggaagccgacgacgtg
atcggcacgctttccaccgaagcggaaaagcgtggcatgaacgtgatcgtgtcgaccggg
gacaaggatctggcgcagctcgtgtcggatcatgtcaccctcatcaatacgatgaccaac
gaaaaactcgaccgcgccggcgttcttgcgaagttcggcgtccccccggagcgcatagtc
gactacctgtcgttgatcggcgataccgtcgacaacgtgcccggcgtcgaaaaatgcggg
ccgaaaaccgcgctcaaatggctgtcgcaatttgagtcgctagatggcatcgtcgcacat
gcagacgagattaaaggtgcggtaggagacaatctgcgacgtgctctggattttctgccg
atggcgcgcaagctcgtcaccgtggagcgtcattgcgatctgaccgggcatctcacgtcg
atcgaggagaatttgcagagccggcccgaatcgcgcgaagaattgcgcgatgtctttacg
cgccacgggttcaagacctggctgcgtgaggtcgaaattgccgatgcggtggaagggccg
gaaaccgacgtgccgcccgcgcttagcgtcgatcacgagcgccactacgaaaccgtgcaa
acgtgggaacagttcgatgcgtggctgcaaaaagtcaacgctgcggagctgacttcgttc
gacaccgaaaccacgtcgctcgatccgatgatcgcgcaaatcgtgggtctgtctttgtcg
gtagaagcgggccatgccgcttatgtgccgctcgcgcatcgcggacccgacgcgcccttg
caactgccgcgcgacgaagtgctttcaaggctcaagccgtggctcgaaagcgcggagcac
aagaaggtcggtcagcatctgaagtacgacgagcaggtgctggccaattacggcatcgag
atgcacggcgtcgaacatgacacgctgctgcaatcgtatgtgctcgaatcgcatcgtccg
catgacatggacaacctggcgttgcgccatctcggcatcaagacgatcaagtacgaagac
gtcgcgggcaagggtgcccaacaaatcggtttcgacgaagtcgcactggacaaagccgcc
gaatacgccgcggaagacgccgacgttacattgcgtctgcatcaggcgctgtacccgcag
cttgctgcggagcaggcgctgcagcatgtctatcgcgacatcgaagtgcccacgtcgcgc
gtattgcgcaagatggagcgtaccggcgttttgatcgacgcggaaaaattgcgtcagcaa
agcagcgaaatcgccgcgcgtctgattcagttggagagcgaggcgtatgtgctcgccggc
ggcgaattcaatctcggctcgccgaagcagatcggtcagatcttcttcgagagactcgaa
ttgccagtcgtgaagaagacgccgagcggcgcgccgtccaccgacgaagaagtacttcag
aagctggccgaagattatccgctgcccaaaatcctgctggaacaccgcggtttgtcgaag
cttaagtcgacctacaccgacaagctgccgcgcatggtcaacgcaacaaccggtcgcgtg
cacacaaattacgcacaggccgttgcggtcacggggcgccttgcgtcgaacgatccgaac
ctgcagaacattcccgtgcgcaccggcgaaggccgccgtattcgcgaggccttcattgcg
ccgccggggcacaagctcgtctcggcggattactcgcaaatcgaactgcgcatcatggcg
cacatttccggcgacgaatcgttgctgcgcgcgttctcgcaaggagaagacattcaccgc
gcgactgcgtccgagattttcagcgtgacgccgctcgaagtgtcgaacgatcagcggcgc
gtcgcgaaggtcatcaacttcggtctgatctatggcatgagttcgttcggcctcgcgtcg
aacctgggcattacgcgcgacgccgcgaagctctatatcgaccgctacttcgcgcgctat
ccgggcgtcgctcgctatatggacgagacgcgtttgagtgcgaaggcgaagggttatgtc
gaaacggtgttcggccgccggctatggctgccggagatcaacggcggcaatggtccgcgt
cgccaggccgcggagcgcgcggccatcaatgcgccaatgcaaggcacggccgccgatctg
atcaagttgtcgatgatcgcggtgcagaagtggatcgaacaatcgaagatcggcacgcgc
atgatcatgcaggtccacgacgaactgatcctcgaagtgccggacgccgaactgtccgaa
gtgcgccagcgtctgcccgagttgatgtgcggtgtcgccgcgctgaaagtcccgctggtc
gccgaagtgggcgcgggactcaactgggaggaagcacattga

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