Paraburkholderia kirstenboschensis: RW095_18270
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Entry
RW095_18270 CDS
T09457
Name
(GenBank) isoamylase
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf00500
Starch and sucrose metabolism
pkf01100
Metabolic pathways
pkf01110
Biosynthesis of secondary metabolites
Module
pkf_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RW095_18270
Enzymes [BR:
pkf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RW095_18270
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GFIT
Motif
Pfam:
Alpha-amylase
ISOA1-3_C
CBM_48
pulA_all-beta
DUF3459
Motif
Other DBs
NCBI-ProteinID:
WOD15252
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Position
2:2099577..2101667
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AA seq
696 aa
AA seq
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MDSPNVGSTRNYQARPGSRFPLGASVVPDGVNFCIFCRHATHLELLLYASTDSVTPFQII
ELAPERNRTFYFWHVLIANLAVPCYYTWRAYGPHGVPQLDDEAAGRHELLDPDARAVSDR
HWHREPATGAREPGHVSFRAIVTEPLPERKDVAVRTLDDAIIYELHVGGYTRDPSSGVRH
PGTFAGLVEKIPYLKELGITHVELLPVMAFDEQDVPAPAAAKGLVNYWGYSTHSFYSPHP
RYCVDPERAPQEFRALLDAMHAAGIRVLLDVVFNHTAEAGLSGPVINFKVLANEVFYHVD
PADGGRYLDYTGCGNTVNCNHPLVSAFILHCLEYWVQEFSVDGFRFDLASVFTRGEGGAL
LRTPPLPWAMEASPVLARVPLIAEAWDAAGLYHVGAFPGMAWAEWNGRYRDVIRRFVRGD
PGMIGQMCTCLAGSADLYQSDGRLPVNSINFVTCHDGFTLRDLVSYDAKRNEANGDDNRD
GSNDNLSWNCGAEGDTDDPSIAGLRMRQARNFIAILLLSQGVPMLLAGDEILRSQRGNNN
AYCQDNALSWMNWHFDADELDMLRFVREMIALRKRHPSLRRRRFFTGATEHGRTHRDVAW
HGERLECPTWGDPSARLVAYTLAGLAPGEPMLHVILNMNADPRDVELPTLDDASWRRIVD
TAAQPPSDIVGTIESAQVEYGNCRVEPRSVVVLESR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
ttggacagccctaacgtcgggagtacgcgcaattatcaggcgcggcccggttcgcgattt
ccgctcggtgcgtcggtcgtgccggacggcgtcaacttctgcattttttgccggcatgcg
acacacctggaactgctgctttacgcttcgacggacagcgttacgccgttccagatcatc
gaactcgcgcccgagagaaaccgcacgttctatttctggcatgtgttgatcgcaaacctt
gcggtgccgtgctactacacatggcgcgcgtacggcccgcatggcgtgccgcaactggac
gacgaagcggccggtcgtcacgagttgctcgatcccgacgcgcgcgcggtcagcgaccgc
cactggcaccgcgagcccgcaaccggtgcgcgggaacccgggcatgtatcgtttcgggcc
atcgtcacggagccgctgcccgagcgcaaagacgtggccgtgcgcacgctcgacgacgcg
atcatctacgaactgcatgtgggcggctacacccgcgatccatcgagcggcgttcgacat
cccggcacgtttgcgggactggtcgagaagattccgtacctgaaggaactgggcatcacg
cacgtcgagctcctgccggtgatggcgttcgatgaacaggatgtgcccgcaccggcagca
gcgaaggggctcgtcaattattggggctacagcacgcatagcttttatagtccgcatccg
cgctattgcgtcgatcctgagcgagcgccgcaggagttccgtgcgttgctcgacgcgatg
cacgcggcgggcatccgcgtgttgctcgacgtggtgttcaatcacaccgcggaagcaggc
ctgagcggtcccgtgatcaatttcaaggtgcttgctaacgaagtcttctatcacgtcgat
ccggccgatggcgggcgctatctcgactacacaggctgcggcaatacggtcaactgcaat
catccgctggtgtcggcgttcatcctgcattgtctcgagtactgggtacaggaattcagt
gtggacggctttcgcttcgatctcgcaagcgtcttcacgcgcggcgagggcggcgctttg
ctacgcacgccaccgctaccatgggccatggaagcgtcgccggtgctcgcgcgcgtgccg
ctgatagccgaggcgtgggacgcggcgggtctttatcacgttggcgcatttccgggcatg
gcgtgggccgaatggaacggccgctaccgcgatgtgatccggcgcttcgtgcgtggcgat
ccgggaatgatcggccagatgtgcacttgcctcgcggggagcgcggacctctatcaatcg
gacggcagactgccagtgaacagcatcaattttgtgacctgtcacgacggttttaccttg
cgcgatctcgtcagctacgacgcgaagcgcaacgaggcgaacggcgacgacaaccgcgac
ggcagcaacgacaacctgtcgtggaactgcggcgccgagggcgacacggatgatccgtcg
atcgccgggctgcgtatgcggcaggcgcgcaatttcatcgcgattctgctgttgagccag
ggcgtaccgatgttgctcgccggggatgagatcctgcgaagccagcgcggcaataacaac
gcgtactgccaggacaacgcgctgtcatggatgaactggcacttcgacgccgacgagctc
gacatgctgcggttcgtgcgcgagatgatcgcgcttcgcaagcgtcacccgagcctgcgc
cgtcgccggttctttacgggcgctacggagcacgggcggacccatcgcgatgtcgcctgg
catggcgagcgactcgaatgtcccacgtggggcgacccgagtgctcgcctcgtcgcgtat
acgctcgcggggcttgcgccgggcgagcccatgttgcacgtgatcctcaacatgaatgcc
gatccgcgcgacgtagagcttcccactctcgacgacgcgagctggcggcgcatcgtcgat
acggctgcgcaaccgccgtcggacattgttgggacgatagagagcgctcaagtcgaatac
ggcaactgccgcgtagagccgcgcagtgtcgtcgtgctcgaatcgcgatga
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