Paraburkholderia kirstenboschensis: RW095_18415
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Entry
RW095_18415 CDS
T09457
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
pkf
Paraburkholderia kirstenboschensis
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkf03000
]
RW095_18415
Transcription factors [BR:
pkf03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RW095_18415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WOD15279
LinkDB
All DBs
Position
2:complement(2141235..2142557)
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AA seq
440 aa
AA seq
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MTRDASLVAVRNRAPGQAPAKATPPASSKEMLNLAQLRAFRLVADRGSATRAAAALFRAQ
SAVTRSVQELESAVGEPLFDRGPSGMLPTPVGRAVLLRCERIFAELEELAQWCSARQARR
RPAAEGALPAYLLNTRRLQIFVALARHRHMPSAAKAFGISQPAVSTAIRVLESGSGLSLF
HRSPRGILLTAEAETFLLHVRRALNELRHVPDDIAALRGNIRGAVTVGALPLGRTLILPK
AIAKMSSDNPGVRVVTDESAYEALVAGLRAGDIDFILGALRENDSTSGLRNERLMSEDMV
LLVRRDHPLTRAHEPSIADLRDVQWILPRSHAPARALFEAQFKRMKIKPPMPTVETADLA
VIRGLLLGTDMVAALSAQQLHYEVQAGQLAVLNVPLHNTRRDIGLTMRAAGTPSPAARAL
IDAIRLSVVDVTRTVSVASS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgacgcatcgctcgttgccgttagaaaccgggcgcccgggcaagcgcctgcg
aaggccacgccccccgcaagcagcaaggagatgctcaatctcgcgcaattgcgcgcattc
cgccttgtcgcggataggggcagtgcaacgcgtgccgccgccgcgctgtttcgcgcgcaa
tcggcggtcacgcgctcggttcaggaactcgagtcagcagttggagaacccctattcgat
cgcggtccttcgggcatgctgcccacacccgttggccgggcggtgctgcttcgctgcgaa
cggatattcgcagagctcgaagaactcgcacaatggtgctctgcgcggcaagcacgccgc
cgccctgctgccgaaggcgcattgcccgcctatctgctgaacacacggcggctgcagatt
ttcgtcgcgctggcacggcaccgtcatatgccgagcgcggccaaagcgttcggtatcagt
cagcccgctgtgagcaccgcgatccgcgtgctcgaaagcggctcgggcctgagccttttt
caccggagcccgcgcggcattctgctcaccgccgaagccgaaacgtttctgctgcatgtg
cggcgcgcgttgaacgaattgcgccacgtacccgacgatatcgccgcactgcgcggcaat
attcgtggcgcggtaacggtcggcgcgctgccgctcgggcgcacgctgatcctccccaaa
gccatcgcgaagatgagctcggacaatccgggcgtgcgggtggtcaccgatgaaagcgcg
tatgaagcgctggtggcgggattgagagcgggcgacatcgacttcattctcggcgcgctg
cgcgagaacgactcgacgagcggcctgaggaacgagcgcttgatgtcggaagacatggtg
cttctcgtgcggcgcgatcatccgctcacgcgcgcacatgagcccagcatcgcggatttg
cgtgacgtgcagtggattttgccgcgcagtcacgcgcccgcgcgggcgctattcgaagcc
cagttcaagcggatgaaaatcaaaccgccaatgcccacggttgaaaccgccgacctcgcg
gtgattcgcggcctgctgctaggcaccgacatggtggcggcgctgtccgcgcagcagttg
cactacgaggtgcaagcggggcaactcgctgtgctcaatgtgcctctgcacaacacccgg
cgcgatatcgggctgaccatgcgcgcggcgggtacgccctctccggcggcccgggcgctg
atcgacgcgattcgtctgtcggtggtcgacgtcacacgcacagtcagtgtcgcgtcaagt
tag
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