Paraburkholderia kirstenboschensis: RW095_19650
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Entry
RW095_19650 CDS
T09457
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
RW095_19650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkf03400
]
RW095_19650
DNA repair and recombination proteins [BR:
pkf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
RW095_19650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF7343
Motif
Other DBs
NCBI-ProteinID:
WOD15493
LinkDB
All DBs
Position
2:2403454..2404404
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AA seq
316 aa
AA seq
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MAARSIASLTLSFGLVSIPVKLYSATDSAAGVGFNLLTPEGGRVKQQYISEATGAVVARA
DMKKGYEFEKGQFVVFAPEELKALEEGASHVVEIVSFVPEKSVDPLYYDKAYFIAPDKRG
GKPYSLLQLAMRESERCALAKWSYKGKTRIVQIRPAEDGMVFQQLLFADEVRALSDLHIE
QVTVSDTELKLALQIIDQVSEDAYDPTAYEDEEKKRILEAIDRKIAGKQIVSPEAPAEES
GGQVIDLLEALRASLSASKEKREAPVRTAATKTPATKKTSPAEVEVLAAKPRRPVKRATP
KADVKEAPPAKVRARK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgttccatcgcatcgctgacactgtccttcggtcttgtgtccattccggtg
aaactgtattcggcgacggatagcgccgcgggtgtgggcttcaatcttctgacgccggag
ggtggccgcgtaaagcagcagtacatctccgaggccacgggcgccgtggtggcgcgcgct
gacatgaagaaggggtacgagttcgagaaagggcagttcgtcgtcttcgctccggaagaa
ctgaaagcgctggaagaaggcgcgagccacgtcgtggagattgtgtcgttcgttcctgag
aagtcagtggacccgctgtactacgacaaggcgtacttcatcgctcccgacaaacgcggc
ggcaaaccctacagcctgcttcagctggccatgcgagaaagcgaacgctgcgcgctggca
aaatggtcgtacaagggcaagacccgaatcgtccagatacggcctgccgaagacgggatg
gtcttccagcaactgctgttcgccgatgaggtgcgcgcgctgagcgatttgcatatcgaa
caggtgactgtgagcgataccgagctcaaactcgcgctgcaaatcatcgaccaggtgtca
gaagacgcctatgacccgacggcttacgaagacgaagagaagaagcggattctggaagcc
attgaccggaagattgcaggcaaacagattgtttcgcctgaggcaccggcggaagagtca
ggcggtcaggtgattgacctgctggaagcacttcgcgccagtctcagcgccagcaaggag
aaacgtgaggcgccggttaggacggcagcgacgaagacgccggcgacgaaaaagacttca
cccgctgaggtcgaggtactcgccgccaaaccgcgtcggcctgtcaagcgcgcgacaccg
aaagcggacgtcaaagaggcgccaccagcaaaggtccgggcacgcaagtga
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