Paraburkholderia kirstenboschensis: RW095_20785
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Entry
RW095_20785 CDS
T09457
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pkf
Paraburkholderia kirstenboschensis
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkf03032
]
RW095_20785
03400 DNA repair and recombination proteins [BR:
pkf03400
]
RW095_20785
Enzymes [BR:
pkf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RW095_20785
DNA replication proteins [BR:
pkf03032
]
Prokaryotic type
DNA Topoisomerases
RW095_20785
DNA repair and recombination proteins [BR:
pkf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RW095_20785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WOD17367
LinkDB
All DBs
Position
2:complement(2632983..2634284)
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AA seq
433 aa
AA seq
DB search
MQNGHASTGDSEKQPATPAMPPGLRHADDSKPGYTRKREKDGFAYFDVQGKRIEDEAEIQ
RINSLAIPPAYEDVWICPDPRGHIQATGRDVRGRKQYRYHPRWRETRDADKYERMAEFGR
ALPRIRARVARDLELPGMPCDKVIAAVVRLLDTTLVRIGSVEYARENQSYGLTTLRKKHV
KVEAGQLRFKFRGKSGIEHDVTVDDQRVKRIVRRCADLPGHDLFQYLDDDGTRRTVGSAD
INDYLRRASGADFTAKDYRTWAGSVYALAALRRLVCGNAAEARRHIVATVKEVAGLLRNT
PAVCRRCYIHPAVISAFETDQLQTLPPGQSRRGLKVDEVAFAALLAHAEKRAARLARQAG
AKGRKLREADTAESINGSITTLLKKSRTIRNEANKAAAKAGANASAKAGARTARRTASTA
VRSAQRAEKTAAS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacggtcatgcatcgaccggcgacagcgagaagcagcccgcgacacccgcgatg
ccgcccggcttgcgccatgccgacgacagcaagccgggctacacgcgcaagcgcgaaaaa
gacggcttcgcgtatttcgacgtgcaaggaaagcgcattgaagacgaagcggagattcaa
cgcatcaactcgctcgcgattccgcccgcgtatgaagacgtatggatctgtccagacccg
cgcggacatattcaggcgaccggccgcgacgtgcgcgggcgcaagcaataccgttatcac
ccgcgttggcgcgaaacgcgcgacgccgacaaatacgaacgcatggccgagttcgggcgg
gcactgccacgaatccgagcgcgcgtcgcccgcgatctcgaactgcccggcatgccatgc
gacaaagtgattgcggcagtcgtgcggctgctcgataccacgctcgttcgcatcggcagc
gtcgaatacgcgcgcgaaaaccagtcatacggcttgacgacgctgcgtaagaaacacgtg
aaggtggaagcgggacagttgcgcttcaagtttcgcggcaagagcggcatcgaacatgac
gtgacggtggacgaccagcgcgtgaagcgcatcgtgcggcgctgcgctgatctgccgggt
cacgacctgttccagtatctcgacgacgacggcacacgccgtaccgtcggttcagccgac
atcaacgattatctgcgccgcgcaagcggcgcggacttcaccgcgaaggactatcggaca
tgggcgggcagcgtctacgcgctcgcggcgctgcggcgcctcgtgtgcggcaacgctgcc
gaagcgcggcgtcatatcgtggcgaccgtcaaggaagtcgcgggcttgctgcgcaacacg
cccgcggtgtgccggcgttgctatatccatcctgcagtgattagcgcattcgaaaccgac
cagttgcaaaccttgccgccgggtcagtcgcgccgcggcctgaaagtggacgaagtagcg
ttcgccgcattgctcgcgcatgccgaaaagcgcgccgccaggctcgcgcgtcaggcggga
gcaaaaggtcgcaagttgcgcgaagcggacaccgctgagagcatcaacggctccatcacg
acgttgctgaagaagtcgcgcaccatccgcaacgaagcgaacaaggcggcagcgaaagcc
ggtgccaatgccagcgcaaaagccggcgcgcgaaccgcacggcgaaccgcgagcacggcc
gttagatccgcgcagcgcgcggagaagacggccgcaagctaa
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