Paraburkholderia kirstenboschensis: RW095_20935
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Entry
RW095_20935 CDS
T09457
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
pkf
Paraburkholderia kirstenboschensis
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkf03000
]
RW095_20935 (prpR)
Transcription factors [BR:
pkf03000
]
Prokaryotic type
Helix-turn-helix
Other families
RW095_20935 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
PAS_8
AAA
AAA_2
PAS_4
PAS
AAA_16
AAA_3
PAS_7
HTH_23
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WOD15715
LinkDB
All DBs
Position
2:2665066..2667066
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AA seq
666 aa
AA seq
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MSTFAPSLINADPARPGIALVSISRLESLCETIAPRYAGRARFFSIREGYGAAVTALQAH
LDAGSVDVVLAAGSNGAYLRDHLSVPVVMVKVNGFDVLSAITRATTLWPSGPIGLVLHET
ISHELADLSGWLSVGMKQRGYRSVDEVRTAVSNLAAEGCRVIIGPGMACDLAQQAGLESV
FLYSLGAVEEAFERSVELARVSRQKESKRVRLNTIVAHLRDGVAAFDDAGQLEAVNPAML
DLLGLERDRDLPAQLARTIGPWLRKALQGDGALEERVEQIGERSVIVNCVPIVEQGARSG
FVVTAQDALVAQRIDRSLRTSQRPKHLVARHRLDDLIGESAALERVRRLARAGAAHDATV
LLTGESGTGKELVAQGIHNASPRRGNPFVAFNCAALPEGLIESELFGHEEGAFTGARRGG
KPGLFEMAHTGTIFLDEIGEMPPALQSRLLRVLQEREVMKLGSGRATPIDVRVIAATHRD
LHGLVDEGAFRADLYFRLNLLQIELPPLRERRADVAPLARHLLSRSALQYGLSEAAIGRA
LKFLAPLFERYAWPGNVRELENLLARAAIYLGDAASDQRDDPDGSIQPDLLALFPEFSRM
GHAGVSARLTETSADAATSGAGRVAPSRDDVLKALERCGGNRAAASRALGIGRTTLWRLL
KAEGVR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgacctttgctccgtctcttatcaacgcagatccggcccgcccgggcattgcatta
gtcagtatcagtcgcctggagtcgctttgcgagactattgcgccgcgctacgccggccgc
gcgagatttttctcgatccgcgaaggctatggcgcggctgtcaccgcgctacaggcgcac
ctcgatgcgggctccgtcgacgtcgtcctcgcggcgggctcgaacggcgcctatttgcgc
gaccacctgagcgtgccggtcgtcatggtgaaggtgaacggcttcgacgtgctgagcgcg
atcacccgcgccaccaccctctggcccagcgggccgatcgggctcgtgctgcacgaaacg
atctcgcatgaactggccgatctcagcggctggttgagcgtcggcatgaaacagcgcggg
taccgctcggtcgatgaagtcagaaccgcagtgagtaacctcgccgccgaaggctgtcgc
gtgatcatcggaccgggcatggcttgcgatctggcgcagcaggcgggtctggaaagcgtg
ttcctgtactcgctcggcgccgtcgaggaagcattcgagcgctcggtcgaactggcgcgc
gtgagccggcagaaggagtccaagcgcgtgcgcctgaacacgatcgtggcgcatctgcgc
gacggcgtggcggccttcgacgacgccggtcagctcgaagccgtcaacccggccatgctc
gatctgctgggcctcgagcgcgaccgggacctcccggcgcaactcgcgcggacgatcggc
ccgtggctgcgcaaggcgctgcaaggtgacggcgcgctcgaggagcgcgtcgagcagatc
ggcgagcgttcggtgatcgtcaattgtgtgccgatagtcgagcagggcgcgcgctcgggg
ttcgtcgtgaccgcgcaggacgcgctggttgcacagcggatcgaccggtcgctgcgcacc
agtcagcggcccaagcatctggttgcgcggcatcggctggacgatctgatcggcgagtcg
gcggcgctcgaacgtgtgcgccggctcgcgcgggccggcgcggcgcacgacgccaccgtc
ttattgaccggcgagagcggcaccggcaaggaactggtcgcgcagggcatccacaatgcg
agcccacggcgcggcaatcccttcgtcgcgttcaattgcgcggcgctgcctgaggggctg
atcgaaagcgaactgttcggccacgaggaaggcgcgttcaccggcgcgcggcgcggtggc
aagccgggcctgttcgaaatggcccacacgggaaccattttcctcgatgaaatcggcgaa
atgccgcccgcgctgcaaagccggctgctgcgcgtgctccaggaacgcgaggtgatgaaa
ctcggctcgggccgcgcgacgcccatcgacgtgcgggtgatagccgccacgcaccgcgac
ctgcacgggctcgtcgacgagggcgcgtttcgcgcggatctgtattttcgtctgaatctg
cttcagatagaattgccgccgctgcgcgagcggcgcgcggacgtcgctccgctcgcgcgg
cacttgttaagccgcagtgcgctccaatatgggttgtctgaagcggcgatcgggcgcgcg
ctgaagtttctggcgccgctcttcgagcgctacgcgtggccgggcaacgtacgcgaactg
gaaaatctgctggcgcgcgcagcgatctatctcggcgatgctgcaagtgatcagcgcgac
gatccggacggcagcatccagcccgatttgctggcgctcttccccgaattcagccgtatg
ggacatgcaggcgtgagcgcgaggcttaccgaaacttccgcggatgccgccacctcgggc
gccggccgcgtcgcgccaagccgtgacgacgtattgaaggcgctcgaacgctgcggcggc
aaccgcgcagcggcaagccgggcgctgggcatcggacgcactacgctctggcggctgctg
aaagcagaaggcgtgcgatag
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