Paraburkholderia kirstenboschensis: RW095_23330
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Entry
RW095_23330 CDS
T09457
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pkf
Paraburkholderia kirstenboschensis
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkf03032
]
RW095_23330 (gyrA)
03400 DNA repair and recombination proteins [BR:
pkf03400
]
RW095_23330 (gyrA)
Enzymes [BR:
pkf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RW095_23330 (gyrA)
DNA replication proteins [BR:
pkf03032
]
Prokaryotic type
DNA Topoisomerases
RW095_23330 (gyrA)
DNA repair and recombination proteins [BR:
pkf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RW095_23330 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WOD19190
LinkDB
All DBs
Position
1:149897..152533
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AA seq
878 aa
AA seq
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MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRMAKIGHELLADIDKETVDFTPNYDGSENEPAILPARIPNLLINGSSGIAVGMAT
NIPPHNLNEVVDACQHLLRNPEATIDELIEIVPAPDFPTAGIIYGVAGVRDGYRTGRGRV
VMRALTHFEEIDRGQRMSIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG
MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLSCFLSHRRE
VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMARPWDSSLV
REMLSRAETENASAGGREAYRPDGLNPSFGMQTDGLYRLSDTQAQEILQMRLQRLTGLEQ
DKIIGEYRDVMAQIADLLDILARPERITAIIVDELTSIKSEFGDARRSKIELNATELNTE
DLITPQEMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATSMKEDDWIDTLFIANTHDHIL
CFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLLEGEKITVVLPVKEFSADKFVFMATA
LGTVKKTPLEAFSRPLRKGIIAVGLDDGDYLIGAAITDGQHDVMLFSDSGKAVRFDENDV
RPMGREARGVRGMQLEDGQNVIALLVAGDEQQSVLTATENGFGKRTPITEYTRHGRGTKG
MIAIQTSERNGKVVAATLVDQEAQIMLITNTGVLIRTRVSEIREMGRATQGVTLISLDEG
TKLSGLQQVAEAEADVDLEGDAEGPADGNNGVEDGGAA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgccaaagagactctgccaatctccctagaggaggaaatgcgccgttcg
tatctcgattacgcgatgagcgtgatcgtagggcgtgcgcttcccgacgttcgcgatggc
ctgaagccggtgcaccggcgcgtgctgtacgcgatgcacgaactgaacaacgactggaac
cgcgcgtacaagaagtcggcgcgtatcgtcggcgacgtcatcggtaagtaccacccgcac
ggcgacacggctgtttacgacacgatcgtccggatggcgcaggacttctcgctgcgctac
atgctggtggacggccagggcaacttcggttcggtcgacggcgacaacgccgcagccatg
cgatacaccgaaatccgcatggccaagatcggccacgaactgctcgcagacatcgacaag
gaaacggtcgacttcacgccgaactacgacggcagcgagaacgagccggccattctgccc
gcgcgcattcccaatctcctgatcaacggctcgtcgggtatcgcggtcggcatggcgacc
aacatcccgccgcacaacctgaacgaggttgtcgacgcgtgccagcacttgctcaggaat
ccggaagccacgatcgacgagttgatcgagatcgttccggcccccgatttcccgaccgcc
ggcatcatctacggcgtggccggcgtgcgcgacggctatcgcaccggccgtggccgcgtg
gtgatgcgcgcgctcacgcacttcgaagagatcgatcgcggccagcgcatgtcgatcatc
gtcgacgaattgccgtatcaggtgaacaagcgctcgcttctcgagcgtattgccgaactg
gtcaacgagaagaagctggaaggcatttccgacatccgcgacgagtccgacaagagcggt
atgcgcgtcgtgatcgaattgaagcgcggcgaagtgccggaagtcgtcctgaacaatctg
tataaggcgacccagcttcaggacactttcggcatgaacatggtcgcgctggtcgacggc
cagccgaagctgctgaatctgaaggaaatgttgtcgtgcttcctgtcgcatcgccgggaa
gtgctgacgcggcgcactgtatacgaactgcgcaaagctcgcgaacgtgggcatgtgctc
gaggggctggccgttgcgctcgccaatatcgacgagttcatcgcgatcatcaaagccgcg
ccgactccgcccatcgcaaagcaggaattgatggcgcgtccgtgggattcctccctcgtg
cgggaaatgttgtcgcgcgccgagacggaaaacgcgtcggccggtggccgtgaagcctat
cgtcctgacggattgaatccgtccttcggtatgcagacggacggcctctaccgcttgtcc
gacacccaggctcaggaaattctgcagatgcgtctgcaacgcctgaccggcctggagcag
gacaagatcattggcgagtatcgcgacgtcatggcgcagattgccgacctgctggacatc
ctggcgcgcccggagcggattacggcgatcatcgtcgacgaacttacgtcgatcaagtcg
gaattcggcgacgcgcgccgctcgaagatcgagctgaacgcaaccgagctgaacaccgaa
gacctgatcacgccgcaagaaatggtcgtgaccatgtcgcacgccggctacgtgaaatcg
cagccgttgtccgaatatcgcgcccagaagcgtggcggtcgcggcaagcaggcgacttcc
atgaaggaagacgactggatcgacacgctgttcatcgcgaacacgcacgaccatattctg
tgcttctccaaccgtggccgcgtgtattgggtcaaggtctacgaagtgccgcaaggctcg
cggaactcgcggggtcgtccgatcgtcaacatgttcccgttgctggaaggcgagaagatc
acggttgtgctgccggtcaaggaattttccgcggacaagttcgtgttcatggcaaccgcg
ttaggaacggtaaagaagacgccgctcgaagccttcagccggccgttgcgcaagggtatt
attgcggtcggtctcgatgacggcgattacctgatcggcgccgctatcacagacggtcag
cacgacgtgatgctgttctccgattcgggcaaggcagttcgcttcgacgaaaatgacgtg
cggccaatgggacgcgaggctcgcggcgtgcgcggcatgcagctcgaagacggccagaac
gtgatcgcgttgctggtggccggcgacgagcagcaatcagtgctcaccgccacggaaaac
ggcttcggcaaacgcacgccgatcaccgagtacacccgtcacggccgcggcacgaagggc
atgatcgcgatccagacgtcggagcgtaacggcaaggtcgttgccgccacgctggtcgat
caggaagcgcagatcatgttgatcaccaatacgggcgttctgattcgtacgcgcgtgtcg
gaaattcgagaaatgggccgtgcaacccaaggtgttacactcatcagccttgacgaaggg
accaagctttcaggtctgcaacaggttgccgaggcagaagcagacgtcgatctggaaggc
gacgccgaaggtcccgctgacggcaacaacggcgtcgaagacggcggtgcggcctga
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