Paraburkholderia kirstenboschensis: RW095_25150
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Entry
RW095_25150 CDS
T09457
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RW095_25150 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkf03400
]
RW095_25150 (xth)
Enzymes [BR:
pkf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RW095_25150 (xth)
DNA repair and recombination proteins [BR:
pkf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RW095_25150 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
RAG1_ZnH2
Motif
Other DBs
NCBI-ProteinID:
WOD19524
UniProt:
A0ABZ0ET26
LinkDB
All DBs
Position
1:complement(559681..560457)
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AA seq
258 aa
AA seq
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MKIATWNVNSLKVRQQHVIDWLETTGTDVLCLQELKLPDEKFPRAELEEKGYRSWFAGQK
TYNGVGILVRQGLNVDESSIVRNIPGFEDLQQRVVAATVEGVRIISAYFPNGQAPGTDKF
AYKLRWLAALHDWIKSEMALYPKLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAEFV
RLIELGLVDAFRQFEQPEKIYSWWDYRMMAFRRNAGLRIDHILLSKPLSEACTSCEVDKV
PRKWDQPSDHAPVVAQIG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcgccacctggaacgtcaactccctcaaagtccgccaacagcatgtgatcgac
tggctcgaaaccaccggcaccgacgtgctgtgccttcaggaactgaagctgcccgacgag
aagttcccacgcgccgaactcgaagaaaaaggctaccgcagctggttcgcgggccagaag
acgtacaacggggtcggcatcctcgtgcgccagggtctgaatgttgacgaaagcagcatc
gtgcgaaatattcccggctttgaggacttgcagcagcgcgtcgtcgcggcgaccgtcgaa
ggcgtgcgtatcatctccgcgtactttcccaacggccaggcgcccggcaccgacaaattc
gcgtacaagctccgctggctcgccgcgctgcacgactggatcaaaagcgaaatggcgtta
tatccgaagctcgcgctgctcggcgactacaacatcgcaccggacgaccgggacgtgcac
gatccgaaggcgtgggaaggtcagaacctcgtgtcgccggaagaacgcgccgagttcgtg
cggctgatcgaactgggtctcgtcgacgcgttccgtcagttcgagcagcccgaaaaaatc
tattcgtggtgggactaccggatgatggcgtttcgccgcaacgcggggctgcgcatcgac
catatcctgctttcgaagccgctctctgaagcgtgcacgtcatgcgaagtcgataaggtg
ccgcgcaagtgggaccagccgtcggaccatgcaccggtcgtcgcgcagatcggctga
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