KEGG   Paraburkholderia kirstenboschensis: RW095_25210
Entry
RW095_25210       CDS       T09457                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pkf  Paraburkholderia kirstenboschensis
Pathway
pkf00010  Glycolysis / Gluconeogenesis
pkf00020  Citrate cycle (TCA cycle)
pkf00260  Glycine, serine and threonine metabolism
pkf00280  Valine, leucine and isoleucine degradation
pkf00310  Lysine degradation
pkf00380  Tryptophan metabolism
pkf00620  Pyruvate metabolism
pkf00630  Glyoxylate and dicarboxylate metabolism
pkf00640  Propanoate metabolism
pkf00670  One carbon pool by folate
pkf00785  Lipoic acid metabolism
pkf01100  Metabolic pathways
pkf01110  Biosynthesis of secondary metabolites
pkf01120  Microbial metabolism in diverse environments
pkf01200  Carbon metabolism
pkf01210  2-Oxocarboxylic acid metabolism
pkf01240  Biosynthesis of cofactors
Module
pkf_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pkf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pkf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pkf_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pkf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RW095_25210 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RW095_25210 (lpdA)
   00620 Pyruvate metabolism
    RW095_25210 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RW095_25210 (lpdA)
   00640 Propanoate metabolism
    RW095_25210 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RW095_25210 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RW095_25210 (lpdA)
   00310 Lysine degradation
    RW095_25210 (lpdA)
   00380 Tryptophan metabolism
    RW095_25210 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RW095_25210 (lpdA)
   00670 One carbon pool by folate
    RW095_25210 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pkf04147]
    RW095_25210 (lpdA)
Enzymes [BR:pkf01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RW095_25210 (lpdA)
Exosome [BR:pkf04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RW095_25210 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA NAD_binding_8 Pyr_redox_3 AlaDh_PNT_C BSH_YknX FAD_binding_2 BSH_Fcp1 BSH_CusB GCV_H Thi4 3HCDH_N BSH_YhbJ TFX_C BSH_RND Peptidase_M23 FAD_binding_3 DAO PASTA
Other DBs
NCBI-ProteinID: WOD19535
UniProt: A0ABZ0ES08
LinkDB
Position
1:576752..578545
AA seq 597 aa
MSLVEVKVPDIGDFKDVDVIEVNIKPGDVIENEQALMTLESDKASIEVPSDTAGTVKEVR
VKAGDKVSQGTIIALVETSADAAPAKDAPKAAAKEPEKAPAEAKPQADAAKPQAAAPAPQ
AGSFSGSADIECDMLVLGSGPGGYSAAFRSADLGMKTVLVERYATLGGVCLNVGCIPSKA
LLHTALVIDEAEALGAHGITFAKPQIDLDKLRDFKSGVVKKLTGGLAGMAKMRKVEVVTG
TGSFVDPNHMEVQTEGGKKVVKFKQAIIAAGSEAVKLPFIPEDSRVVDSTGALELRQIPQ
RMLVIGGGIIGLEMATVYATLGAQIDVVEMLDGLMAGADRDLVKVWEKYNSKRFANVMLK
TKTVAAEAKDDGIYVSFEGEKAPAEAQRYDLVLVAVGRSPNGKKIGADKAGVAVTDRGFI
DVDKQMRTNVPHIFAIGDIVGQPMLAHKAVHEGHVAAEAAHGEKAYFDALQIPSVAYTDP
EVAWAGKTEDQLKAEGIKYGKAVFPWAASGRAIANGRDEGFTKLLFDEETHRVIGGGIVG
LNAGDLISEVCLAIEMGADATDIGKTIHPHPTLGESIGMAAELYEGVCTDLPPQKKK
NT seq 1794 nt   +upstreamnt  +downstreamnt
atgagtctcgtcgaagtaaaagtgccggatatcggtgacttcaaggacgtcgatgtcatc
gaagtcaacatcaaaccgggcgacgtcatcgagaacgaacaggcgctgatgacgctcgag
tccgacaaggcttccattgaagtgccgagcgataccgccggcaccgtcaaggaagttcgc
gtgaaggccggcgacaaagtttcgcaaggcacgatcatcgcgctcgtcgaaacgtcggcg
gacgcggcgcccgccaaagatgcgcctaaggctgcggccaaggagcccgagaaagcgccg
gctgaagcgaaacctcaggccgacgcggcgaagcctcaagccgccgcacccgcgccgcaa
gccggcagtttctccggcagcgcggacatcgaatgcgacatgctcgtgctcggctcgggc
cctggcggctattccgccgcgttccgttcggccgatctcggcatgaagacggtgctggtc
gaacgctacgcaacgctgggcggcgtctgtctgaacgtcggctgtattccgtcaaaagcg
ctgctgcacaccgcgctcgtgatcgacgaagccgaagcgctcggcgctcatggcatcacg
ttcgcaaagccgcagatcgatctggacaagctgcgcgacttcaagtcgggcgtcgtcaaa
aagctgacgggtggcctcgctggcatggccaagatgcgcaaggtcgaagtagtgacgggg
accggctctttcgttgatccgaatcacatggaagtgcagaccgaaggcggcaagaaggtc
gtgaagttcaagcaggcgatcatcgccgcgggctcggaagcggtgaagctgccgtttatt
ccggaagattcgcgcgtggtggattcgaccggcgcgctcgaacttcgtcagattccgcag
cggatgctggtgatcggcggcggcatcatcggcctggaaatggcgacggtgtacgccacg
ctcggcgcgcagatcgacgtcgtcgaaatgctcgacggcctgatggcaggcgctgaccgc
gatctcgtcaaggtttgggagaagtacaacagcaagcgtttcgcgaacgttatgctgaag
accaaaactgtcgcggccgaggcgaaggacgacggcatctacgtgtcgttcgaaggcgaa
aaggccccggccgaagcccaacgctacgacctggtactggtggcagtcggccgctcgccg
aatggcaagaagatcggcgccgacaaagctggcgtggcggtgacggatcgcggttttatc
gacgtcgacaagcagatgcgcacgaacgtgccgcacatctttgcgatcggcgatatcgtc
ggtcagccgatgctcgcgcataaagccgtgcacgaaggtcacgttgccgccgaagcggct
cacggcgagaaggcgtacttcgacgcgctgcagattccgtcggtggcgtacaccgatccc
gaagtcgcgtgggccggcaagacggaagaccagttgaaggccgagggcatcaagtacggc
aaggcggtgttcccgtgggccgcttcgggccgcgcgattgccaacggacgcgacgagggc
ttcacgaagctgctgttcgacgaagaaacgcatcgcgtgatcggcggcgggattgtcggc
ctgaatgcaggcgacctgatcagcgaggtgtgcctcgcgatcgaaatgggcgcggatgca
accgacatcggcaagaccattcacccgcatcccacgctcggcgaatcgatcggcatggct
gccgaactctacgaaggcgtgtgtacggacttgccgccgcagaaaaagaagtaa

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