Paraburkholderia kirstenboschensis: RW095_25355
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Entry
RW095_25355 CDS
T09457
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf00541
Biosynthesis of various nucleotide sugars
pkf01100
Metabolic pathways
pkf01250
Biosynthesis of nucleotide sugars
Module
pkf_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RW095_25355 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pkf01005
]
RW095_25355 (kdsA)
Enzymes [BR:
pkf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
RW095_25355 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pkf01005
]
Lipid A
RW095_25355 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WOD19563
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Position
1:608956..609810
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AA seq
284 aa
AA seq
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MKLGDFEIGLDKPFFLIAGTCVVESEQMTIDTAGRLKEICAKLNIPFIYKSSYDKANRSS
GKSFRGLGMDEGLRILSEVKRQLGLPVLTDVHAEHEIEQVASVVDVLQTPAFLCRQTDFI
HACARSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVSFGYNNLVS
DMRSLAIMRETNAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVAVGVAGLFMETH
PNPAQAKSDGPNAVPLNRMGDLLETLVTLDQAVKRAPFLESDFS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgggcgatttcgaaatcgggctcgacaagccgtttttcctgatcgcgggcacc
tgtgtcgtcgaatcggagcaaatgacgatcgacacggcgggccggctgaaggaaatctgc
gcgaagctgaacatcccgttcatctacaaatcgtcgtacgacaaagccaatcgcagtagt
ggcaaatcgtttcgcggtctcggcatggacgaagggttgcgcatcctgtcggaagtgaag
cgtcagctcggcctgccggtgctgaccgacgttcacgcggagcacgagatcgaacaggtc
gcttcagtggtcgatgtgctgcaaacgccggctttcctgtgccgtcaaactgactttatc
cacgcgtgcgcgcgttcgggcaaaccggtcaatatcaagaaaggccagtttctcgcgccg
cacgacatgaaaaacgtcatcgacaaggcgcgcgacgcggcacgcgaggccggtctgtcg
gaagaccgcttcatggcgtgcgagcgcggcgtctcgttcggctataacaacctcgtgtcc
gacatgcgttcgctcgcgatcatgcgtgaaacgaatgcgccggttgtgttcgacgccacg
cattctgtgcagttaccaggcgggcagggtacgagctcgggtgggcagcgcgaattcgtg
ccggtgcttgcacgtgccgcggtggcagtcggcgtcgcgggtctcttcatggaaacgcac
ccgaatccggcgcaggccaaatcggacggtccgaacgccgtgccgctaaaccgcatgggc
gatctgctagagacgctcgtcacgctcgatcaggctgtcaagcgcgcgccgttcctcgaa
agcgatttcagctga
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