Paraburkholderia kirstenboschensis: RW095_25805
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Entry
RW095_25805 CDS
T09457
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RW095_25805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkf03400
]
RW095_25805
Enzymes [BR:
pkf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RW095_25805
DNA repair and recombination proteins [BR:
pkf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RW095_25805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
KCTD18_C
Motif
Other DBs
NCBI-ProteinID:
WOD19638
LinkDB
All DBs
Position
1:702798..704006
Genome browser
AA seq
402 aa
AA seq
DB search
MALHESVLEEFGLAPRWVRRGMAAAQEAAHGPGAEQGANAPRPHGASDLTRLDARESSSI
GLAPQTSPTPAMRAGEPSRRADGVAQAQTRIENDTPGRETQRSQPIAPRDDLQQAEPVER
AEDSARFAGQSEKREPRPAPEATQQRAPLAAQSRDPATAEPRMQEPSSFDAPPADDFAWF
DDLPLQPPGDASAPMHARRDTPEPPAIHTLDWDALSERVSTCERCRLCETRTRTVFGVGD
RNADWMLIGEAPGENEDRVGEPFVGQAGKLLDNMLRSLTLARDTNVYIANVIKCRPPGNR
NPEPDEVARCEPYLQRQVGLVKPKLIVALGRFAAQSLLKTDASISSLRGRVHEYEGVPVI
VTYHPAYLLRSLPDKAKAWADLCLARDTWRAAGGAASNAANE
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcatgaatcggtactggaagagttcgggctcgcgccgcgctgggtgcgtcgc
gggatggccgcggcgcaggaagcagctcacgggcccggcgcggagcagggcgccaacgcg
ccgcgcccgcacggtgcgagcgacctcacacggctcgatgcgcgcgagtcttcttcgatc
gggttggcgccgcagacgtcgcccacgcccgctatgcgcgcgggagagccgtcgcgacga
gccgacggcgtcgcgcaggcccaaacgcgtattgaaaacgatacgccaggtcgcgagact
cagcggtcccagccgatagcgccgcgcgatgatttgcagcaggcagagccggttgagcgt
gctgaagactccgcgcgcttcgctggtcaatcggaaaaacgcgaaccacggcctgcgccg
gaggcgacccaacagcgcgcgccacttgccgctcaaagccgcgatccggcaaccgccgag
ccgcgcatgcaagagccgtcctcgttcgacgctccgcccgccgacgacttcgcctggttc
gacgatctcccgcttcaaccgccgggcgacgctagcgcgcccatgcacgcgcgccgcgac
acgcccgaacctcccgcgatccacacgctcgactgggacgcactgagcgagcgggtctcg
acctgcgagcgctgccggctgtgcgagacgcgcaccaggactgttttcggcgtgggagat
cggaacgccgactggatgctgatcggcgaagcgcccggcgagaacgaggaccgcgtgggc
gagccgtttgtcggccaggccggcaagctgctcgacaacatgctgcgttcactcacgctg
gcgcgcgacaccaacgtgtatatcgcgaacgtcatcaagtgccggccgcccggcaaccgc
aatccggagcccgacgaagtcgcgcgttgcgaaccatatctgcaacgccaggtggggctc
gtgaaaccgaagctgatcgtcgcgctcggtcgcttcgccgcgcaaagcctgctcaagacc
gacgcgagcatttcgtcgctgcgcggccgcgtccacgagtacgagggtgtgccggtgatc
gtcacctatcacccggcctatctgctgcgtagcctgccggacaaggccaaggcatgggcc
gatttgtgtctcgctcgcgatacgtggcgtgcggccggtggcgcagcgtcgaacgcggcg
aacgagtga
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