Paraburkholderia kirstenboschensis: RW095_27330
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Entry
RW095_27330 CDS
T09457
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf03030
DNA replication
pkf03430
Mismatch repair
pkf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RW095_27330 (dnaX)
03430 Mismatch repair
RW095_27330 (dnaX)
03440 Homologous recombination
RW095_27330 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkf03032
]
RW095_27330 (dnaX)
03400 DNA repair and recombination proteins [BR:
pkf03400
]
RW095_27330 (dnaX)
Enzymes [BR:
pkf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RW095_27330 (dnaX)
DNA replication proteins [BR:
pkf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RW095_27330 (dnaX)
DNA repair and recombination proteins [BR:
pkf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RW095_27330 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
AAA_18
TsaE
Mg_chelatase
DUF3646
AAA_assoc_2
AAA_2
AAA_24
Glyco_tranf_2_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WOD19923
LinkDB
All DBs
Position
1:1012446..1015247
Genome browser
AA seq
933 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSTPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPSHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLEHILGEENVPYEAQALRLLARAADGSMRDALSLTDQAIAYSANQVNEEAVRGM
LGALDQSYLIRLLDALAEGDGAAVLSVADEMALRSLSFSTALQDLASLLHRIAWAQFAPS
SVLDEWPEAGDLRRFADTLSAEQVQLFYQIATIGRSELGLAPDEYAGFSMTLLRMLAFEP
APTGGGGGAAGPGRQAGQAGASGAKRAGTPAVAAAQGAAGLSAAVAASPTRAAGSRGAVS
QAEPVREPAGVAGAAGSAPASVSRRQEVAASTQAVSASGDAAQKTAQNPAPPKSDPAFKT
ESAPIQDEATTAQTPARVNVPAPAAGAPAAGTSAASDGTPARALAPWDEEPEVAVGNQAQ
ASDTSAAEAASASVTADPAPSQTPPTLAAADTPAALVSELTSAETASPESTPPAPLSAPA
AAAFARASEAASATDSNEAAEPAPAMLPDAPPRRAGGASAALDVLRSAGLKVSSDRGRAN
AASPAKPAAPSIPKPAAPRVVVPVPTPGAPRGAAQQESASGARAAAPAATPAQSAARKEP
QSNGSPVPPWDDMPPDDYVPLSASDDGYYGPPDDNYMPVFDSGPDDVRVNAPTSAPAPVV
DQRPLPPPVPLDPLGFKGDWPALAVDLPLKGISYQLAFNSELMALEGNTLKLNVPVPQYA
EASQVAKLKSALADKLGQHVDVQVEVGPARRTAASHDAAMRAQRQQEAEREIGADPFVQS
LIREFGASIVPGSIRPISSIDPDAGPNGASSVH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaaatggcggccgaaagatttcgcgtcgctcgtcgga
caggagcacgtggtgcgcgcgctcacgcacgcgctcgacggcggccgtctgcatcacgcg
tatctgtttaccggcacgcgtggcgtcggcaagacgacgctgtcgcgcatcttcgccaaa
gcgctgaactgcgaaaccggtgtgacgtccacgccgtgcggcgtctgccgggcctgccgt
gaaatcgacgaagggcgctttgtcgattacgtcgagatggacgcggcgagtaatcgcggc
gtagacgaaatggccgcgctgctggagcgcgcggtgtacgcgccggtggatgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctcacgaaccacgccttcaacgcaatgctg
aagactctggaagagccgccgtcgcacgtcaagttcattctcgccaccaccgatccgcag
aaaattccggtcacggtgctgtcgcgctgtctgcaattcaatctgaagcagatgccggcc
ggccacatcgtctcgcatctcgaacacatcctgggcgaagagaatgtgccgtacgaggcg
caggcgttgcgcctgctcgcgcgcgccgccgacggttcgatgcgcgacgcgctctcgctg
accgaccaggcaattgcctattcggcgaatcaggtgaatgaagaggccgtgcgaggcatg
cttggcgcgctcgatcagagctacctgatccgactgctcgacgcgctcgccgaaggcgac
ggcgccgccgtgctgtcggttgccgacgaaatggcgctgcgcagcctgtcgttttcgacg
gcattgcaggatctcgcgagcctgctgcatcgcatcgcgtgggcgcagttcgcaccgtcg
tcggtgctggacgagtggccggaggcgggcgacctgcgccgctttgcggatacgctcagc
gccgaacaggtgcagttgttctatcagatcgcgacgatcggccggagcgaactgggtctc
gcgcccgacgaatacgccggtttcagcatgacactgctgcgcatgctggccttcgagccc
gctccaacgggcggcgggggtggagcagccggacctggccggcaagccggtcaggcaggc
gcgagcggagcgaagcgggcggggacgcccgcggtagcggcggcgcaaggagcggcgggt
ttgtcggcggcagttgctgcgtcgcccacacgggcggcgggctcgcgcggcgctgtttcc
caggcggagccggttcgggaaccagcaggcgttgccggtgctgccgggagcgcgcctgca
agcgtcagtcggaggcaggaggtcgcggcaagcacacaagctgtatccgcctccggcgat
gccgctcaaaagacggcccaaaatccggcgccgccaaaatcggacccggcgttcaaaaca
gagtcggcgccgatccaggacgaagccactaccgcccagacgcctgcgcgcgtcaatgtg
cccgcgcccgccgcgggagcgcccgccgcgggaacgtccgccgcttcggatggtacgcca
gcgcgtgcgttggctccgtgggacgaggagcccgaagtggctgtcggcaaccaggcccag
gcgtcggacacgagcgctgccgaagcagcgtccgcttcagtgaccgccgacccagcgcct
tctcaaaccccgccgacgctcgcagcagcggatacgcctgctgcgcttgtatcggaattg
acgtccgcggagacagcgtctccggaaagcacgccgcccgccccgctcagcgcaccggca
gccgccgcgttcgcgcgcgcgagcgaagccgcgtccgcgaccgattcgaatgaagcggcc
gagcccgcgcctgcgatgttgcccgacgcaccgccgcgccgcgctggcggcgcgagcgcc
gcactcgacgttctgcgcagcgccggcctgaaggtgtcgtccgaccgtggccgcgcgaac
gccgcctcgcccgcgaagcctgcggcgccttcaattccgaagccggctgcgccgcgcgtg
gtggttccggtgccgacgcccggcgcgccgcgcggcgcggcacagcaggagtccgcatcg
ggcgctcgcgcggcagcacccgcagcgacgccagctcaatctgcggcgcgtaaagagccg
cagtcaaacggctcgccggttcctccgtgggacgacatgccgccagacgactacgtgccg
ctttcggcatcggatgacggctattacggaccgcccgacgacaactacatgcccgtgttc
gacagcggccctgacgacgtccgcgtgaacgcgccgacgtctgcgcccgcgccggtcgtc
gatcagcgtccgctgccgccccccgtgccgctcgatccgctcgggttcaaaggcgactgg
cccgcgctcgccgtcgacctgccgctcaagggcatctcgtatcagctggcgttcaacagc
gaactgatggcgctcgaaggcaatacgctgaaactgaacgtgcccgtgccgcaatacgcg
gaagcctcgcaggtcgcgaaactgaaaagcgcgctcgccgacaagctcggccagcatgtc
gacgtgcaggtcgaagtcggcccggcgcgccgcacggcagcctctcacgacgccgccatg
cgggcacaacgtcagcaggaggcggagcgcgaaattggcgccgatccgttcgtgcagtcg
ctgatccgcgagttcggcgcgagcatcgtgccgggctcgatccgcccgattagttcgatt
gatccggacgccggcccgaacggcgcgtcctccgttcactga
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