Paraburkholderia kirstenboschensis: RW095_27435
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Entry
RW095_27435 CDS
T09457
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pkf
Paraburkholderia kirstenboschensis
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkf03009
]
RW095_27435 (rimO)
Enzymes [BR:
pkf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RW095_27435 (rimO)
Ribosome biogenesis [BR:
pkf03009
]
Prokaryotic type
ribosomal protein modification factors
RW095_27435 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Methyltransf_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WOD19942
LinkDB
All DBs
Position
1:1037212..1038603
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AA seq
463 aa
AA seq
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MPQTIPSTSPTPSSPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTC
GFIDEAVQESLDAIGEALNENGKVIVTGCLGAKKSASGSGLIEEVHPKVLAVTGPHALGE
VMQHVHTHLPKPHDPFVDLVPAAGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR
PVAEVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVGALGEL
AAQYGAWVRLHYVYPYPSVDEVIPMMAAGPYKGHVLPYLDVPFQHAHPEVLKRMKRPANA
EKVMERVKAWREMCPDLTIRSTFIAGFPGETEEQFQTLLDFIREAELDRVGCFAYSPVEG
ATANELDGALPDEVREERRARFMEVAEEVSAKRIAKKVGKTLKVLVDEINVDGGIGRTAA
DAPEIDGVVYIAPAVKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagaccattccctccacctcgccgacgccttccagtccgaaggtcggcttcgtc
agcctcggctgcccgaaagctctcgtggactccgagcagatcatcacccagctgcgcgcc
gaaggctatgaaatttccggcacgtatgacggcgcggacctcgtggtcgtcaatacctgc
ggcttcatcgacgaagcggtgcaggaaagcctcgacgccatcggcgaggcactcaatgaa
aacggcaaggtgatcgtcaccggctgcctcggcgcgaagaagagcgcgagcggctcgggg
ctcattgaagaagtgcatccgaaggtgctggccgtcaccggtccgcacgcgttgggcgag
gtgatgcagcacgtgcacacgcatctgccgaagccgcacgatccgttcgtcgatctcgtg
ccggccgctggcgtgaagctcacgccgcgtcactacgcgtatctgaagatttccgaaggc
tgcaatcaccgctgcacgttctgcatcatcccgtccatgcgcggcgatctcgtttcgcgc
ccggtcgcggaagtgatgctcgaagcggaaaatctgttcaagtccggcgtgaaggaactg
ctcgtcatttcacaggacacgagcgcgtacggcgtcgacgtcaaatatcgcacgggcttc
tggaacggcaagccgatcaagacgcgtatgaccgatctggtcggcgcactcggcgaactg
gccgcgcaatacggtgcgtgggtgcgcctgcactacgtgtatccgtatccgagcgtggac
gaagtcatcccaatgatggcggcaggtccgtacaaaggtcacgtattgccgtatctcgac
gtgccgttccagcacgcccatcctgaagtgttgaagcgcatgaagcgcccggccaacgcc
gagaaagtgatggagcgcgtgaaggcgtggcgcgaaatgtgcccggacctgacgatccgc
agcacgtttatcgccggctttccgggcgagaccgaagaacagtttcagacgctgctcgac
ttcatccgcgaggcggaactggatcgtgtcggctgctttgcctactcgccggtcgaaggc
gctacggcgaacgaactcgacggcgcgttgcccgatgaagtacgcgaggagcgccgcgcg
cgtttcatggaagtggccgaggaagtgtcggcgaaacggatcgcgaagaaggtcggcaag
acgctgaaagtgctggtcgacgaaatcaacgtcgacggcggtattggccgcacggccgcg
gatgcgccggagatcgacggcgtcgtgtatatcgcccccgccgtgaaggcgtcgaagcgt
tataaggtcggcgatttcgtgtcggtgaagatcaccggcgcggacggccacgacttgtgg
ggcgaggtctga
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