Paraburkholderia kirstenboschensis: RW095_29510
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Entry
RW095_29510 CDS
T09457
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf00061
Fatty acid biosynthesis
pkf00071
Fatty acid degradation
pkf01100
Metabolic pathways
pkf01212
Fatty acid metabolism
pkf02024
Quorum sensing
pkf04146
Peroxisome
Module
pkf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RW095_29510
00071 Fatty acid degradation
RW095_29510
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RW095_29510
09145 Cellular community - prokaryotes
02024 Quorum sensing
RW095_29510
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pkf01004
]
RW095_29510
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pkf04147
]
RW095_29510
Enzymes [BR:
pkf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RW095_29510
Lipid biosynthesis proteins [BR:
pkf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RW095_29510
Exosome [BR:
pkf04147
]
Exosomal proteins
Exosomal proteins of breast milk
RW095_29510
Exosomal proteins of breast cancer cells
RW095_29510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WOD20331
UniProt:
A0ABZ0EUN2
LinkDB
All DBs
Position
1:1534310..1536142
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AA seq
610 aa
AA seq
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MTQPTQASLSPAAANQATGAAHADAAATPHAMQDATGRPNQSPNTDGIWYASYPADVPHE
IDVGKYDSVVHFFDECIAQFRERVAYVSVGASLTYGELGRKATAFAAYLQSIGVKPGERV
AIMLPNTFQYPVSLFGILKAGAVVVNVNPLYTVRELAYQLKDSGAQTIIVFENFAKTVQD
ALPGTKVQNVIVTGLGDLLADGLNLKGRLLNFMLRHVKKMVPAYTLPNAVALLEALAIGY
TRPLTPVRPTHHDIAFLQYTGGTTGVAKGAMLTHRNIIANLLQAKAWAEGQLSGEVETVL
TPLPLYHIYSLTVNALIFMGLGGRNILIANPRDMKRVMMIIRHEKFTGMTAVNTLYNAFL
ENEEFCKRDFSDLKLAMAGGMATQRSVAERFKAVTGKPIIEGYGLTECSPIVSMNPVDIS
NLREFEGSIGLPAPSTQVRFKKDDGSWANIGEAGELCVKGPQVMKGYWNRPEETAKVIDD
EGWLATGDIGVMDSRGFIRLIDRKKDMILVSGFNVYPNEIEDVIAAHPDVREVAAIGVPD
DAQGERVKVFIVKRNPSLTAEQVIAHCRKNLTGYKVPKVVEFRDDLPQTNVGKILRRALR
DEELAKQKTA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcccactcaagcctcgctatcgcccgccgctgcgaatcaggcgaccggggcc
gctcatgcagacgcggcggcaactcctcacgcaatgcaagacgcaacggggcgccctaac
cagtcgcccaacaccgacggcatctggtacgcgtcgtatcccgccgacgtgccgcatgag
atcgacgtcggcaaatacgactccgtcgtgcacttcttcgacgaatgcatcgcgcaattc
cgtgagcgcgttgcctacgtgagcgtcggcgcgagcttgacctatggcgaactcggccgc
aaggcgacggccttcgccgcgtatctgcaaagcatcggcgtgaagccgggcgagcgcgtc
gcgatcatgctgccgaatacgtttcaatatccggtgtcgctgttcggcatactgaaagcc
ggcgcggtggtggtcaacgtgaatccgctctataccgtgcgcgaactcgcgtatcagttg
aaggacagcggcgcgcagaccatcatcgttttcgagaactttgcgaagacggtgcaggac
gcgctgccgggcaccaaggtgcagaacgtgatcgtgacgggactcggcgatctgctcgcc
gatggtctgaatctgaagggacgtctgctcaatttcatgctgcgccacgtgaagaagatg
gtgcccgcgtacacgctgccgaacgccgttgcgttgctggaggcgcttgccatcggttat
acgcggccgctcacgcctgttcggccaacgcatcacgacatcgcgtttcttcagtacacc
ggcggaacgaccggcgtcgcgaaaggcgcgatgctcacgcaccggaacatcatcgccaat
ctgctgcaggcaaaggcgtgggccgaaggtcaattgagcggcgaagtcgaaaccgtgctc
acgccgctgccgctctatcacatctattcgctgacggtgaacgcgctgatcttcatgggt
ctcggcgggcgcaacattctgatcgcgaatccgcgcgacatgaagcgcgtgatgatgatc
atccgtcacgagaaattcaccggcatgacggcggtcaacacgctctacaacgcgtttctc
gagaacgaggaattctgcaagcgcgatttctccgacctgaaactggcaatggcgggcggc
atggcaacgcagcggtcggtggccgagcgcttcaaggccgtcacgggcaagccgattatc
gaaggctacggcttgaccgaatgctcgcctatcgtgtcgatgaatcccgtcgacatctcg
aacctgcgcgagttcgaaggctcgatcggcctccccgcgccctccacgcaagtccgcttc
aagaaagacgacggcagttgggccaacatcggcgaagcgggcgaattgtgcgtgaagggg
ccgcaggtcatgaaaggctactggaaccggccagaagaaacggcgaaggtgatcgacgac
gaaggttggcttgcgaccggcgacatcggcgtgatggattcgcgcggcttcatccggctg
atcgaccgcaagaaagacatgattctggtctcgggcttcaacgtctatccgaacgagatc
gaggacgtgatcgcggcgcaccccgatgtgcgcgaagtagctgcaatcggtgtgcccgac
gacgcccagggggaacgcgtgaaggtgttcatcgtgaagcgcaatccgtcgctgaccgcc
gagcaggtgatcgcgcattgccgcaaaaacctgacgggatacaaggtgccgaaggtagtc
gagtttcgtgacgatctgccgcaaaccaacgtcggcaagattctgcgccgcgcgctgcga
gacgaggaactcgcgaagcaaaagactgcctga
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