KEGG   Paraburkholderia kirstenboschensis: RW095_29585
Entry
RW095_29585       CDS       T09457                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pkf  Paraburkholderia kirstenboschensis
Pathway
pkf00010  Glycolysis / Gluconeogenesis
pkf00020  Citrate cycle (TCA cycle)
pkf00260  Glycine, serine and threonine metabolism
pkf00280  Valine, leucine and isoleucine degradation
pkf00310  Lysine degradation
pkf00380  Tryptophan metabolism
pkf00620  Pyruvate metabolism
pkf00630  Glyoxylate and dicarboxylate metabolism
pkf00640  Propanoate metabolism
pkf00670  One carbon pool by folate
pkf00785  Lipoic acid metabolism
pkf01100  Metabolic pathways
pkf01110  Biosynthesis of secondary metabolites
pkf01120  Microbial metabolism in diverse environments
pkf01200  Carbon metabolism
pkf01210  2-Oxocarboxylic acid metabolism
pkf01240  Biosynthesis of cofactors
Module
pkf_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pkf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pkf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pkf_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pkf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RW095_29585 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RW095_29585 (lpdA)
   00620 Pyruvate metabolism
    RW095_29585 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RW095_29585 (lpdA)
   00640 Propanoate metabolism
    RW095_29585 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RW095_29585 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RW095_29585 (lpdA)
   00310 Lysine degradation
    RW095_29585 (lpdA)
   00380 Tryptophan metabolism
    RW095_29585 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RW095_29585 (lpdA)
   00670 One carbon pool by folate
    RW095_29585 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pkf04147]
    RW095_29585 (lpdA)
Enzymes [BR:pkf01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RW095_29585 (lpdA)
Exosome [BR:pkf04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RW095_29585 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 AlaDh_PNT_C FAD_binding_2 FAD_oxidored HI0933_like NAD_binding_8 FAD_binding_3 GIDA 3HCDH_N DAO Lys_Orn_oxgnase Thi4 Amino_oxidase 2-Hacid_dh_C XdhC_C Lycopene_cycl TXNDC16_N
Other DBs
NCBI-ProteinID: WOD20346
LinkDB
Position
1:complement(1547570..1549000)
AA seq 476 aa
MSKEFDVVVIGAGPGGYIAAIRAAQLGKTVACIEKWKNPAGTLKLGGTCLNVGCIPSKAL
LASSEEFENASHHLADHGISVENVKVDISKMMARKDGIVEKMTKGIEFLFRKNKITWLKG
HGKFTGKTDAGVQIEVSGEGETEVVTAKNVIIATGSKARHLPNIPVDNKIVADNEGALAF
DTAPKKLAVIGAGVIGLELGSVWRRLGAEVTVLEALPEFLGAADQALAKEAAKQFKKQGL
DIHVGVKVGEVTTTENNVTINYTDKDGNAQKLEADRLIVSIGRVPNTDNLGLEAIGLKAN
ERGFIDVDDHCATAVPNVYAIGDVVRGPMLAHKAEDEGVLVAEIIDGQKPHIDYNCIPWV
IYTEPEIAWVGKTEQQLKSEGREIKTGQFPFMANGRALGINKADGFVKMIADAKTDELLG
VHIISANASDLIAEAVVAMEFKAASEDLGRICHPHPSLSEVMREAALAVDKRALNM
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgtccaaagaatttgacgtcgtcgtgattggcgcaggccctggcggttatatcgccgcc
atccgcgcagcgcagctcggcaagaccgtcgcatgtatcgagaaatggaagaacccggcc
ggcacgctgaagctcggcggcacgtgtctgaacgtgggttgcattccgtcgaaggcgctg
ctcgcgtcgtcggaagagtttgaaaacgcatcgcatcacctcgctgaccacggcatttcg
gtggaaaacgtgaaggtcgacatctcgaagatgatggcccgcaaagacggcatagtcgaa
aagatgacgaagggcatcgaattcctgttccgcaagaacaagatcacgtggctcaagggt
cacggcaagttcaccggcaagacggacgccggcgtgcagatcgaagtgagcggcgagggc
gaaaccgaagtggtcacggcaaagaacgtgatcatcgccacgggttcgaaggcacgccat
ctgccgaacattccggtcgacaataagatcgtcgccgacaacgaaggcgcactcgctttc
gacacggcaccgaagaagctggccgtgatcggcgcgggcgtgatcggcctggaattgggc
tcggtgtggcgccgtctgggcgcggaagtgaccgtgctcgaagcgctgccggaattcctc
ggcgcggctgaccaggcgctcgcgaaagaagcggccaagcagttcaagaagcagggtctc
gacattcacgtcggcgtgaaggtcggcgaagtgacgaccactgagaacaacgtcacgatc
aattacacggacaaggacggcaacgcgcagaagctcgaagccgaccgcctgatcgtgtcg
atcggccgcgtgccgaacacggacaacctcggcctcgaagcgattggcctgaaggccaac
gaacgcggctttatcgacgtcgacgatcattgcgcgacggccgtgccgaacgtgtacgcg
atcggcgacgtggtccgtggaccgatgctcgcgcacaaggccgaagacgaaggcgtgctg
gttgccgagatcatcgacggtcagaagccgcatatcgactacaactgcattccgtgggtg
atctacaccgagccggaaatcgcgtgggtcggcaagaccgagcagcaactgaagtcggaa
ggccgcgagatcaagacgggccagttccccttcatggcaaacggccgcgcactcggcatc
aacaaggcggatggtttcgtcaagatgatcgccgacgcaaagaccgacgaactgctcggc
gtgcacatcatctcggcgaacgcatcggacctgatcgcggaagccgtagtcgcaatggaa
ttcaaggcggcgtcggaagaccttggccgcatttgccatccgcacccgtcgctgtcggaa
gtcatgcgcgaagcggcactcgccgtggacaagcgcgcattgaacatgtaa

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