Paraburkholderia kirstenboschensis: RW095_30555
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Entry
RW095_30555 CDS
T09457
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RW095_30555 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkf03400
]
RW095_30555 (uvrA)
DNA repair and recombination proteins [BR:
pkf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RW095_30555 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RW095_30555 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
AAA_29
AAA_21
SMC_N
nSTAND1
AAA_16
RsgA_GTPase
AAA_33
AAA_22
AAA_23
AAA_25
AAA_18
NACHT
nSTAND3
Viral_helicase1
UvrA_DNA-bind
ATPase
DnaJ_CXXCXGXG
DUF4350
SbcC_Walker_B
RNA12
DUF87
Motif
Other DBs
NCBI-ProteinID:
WOD20517
LinkDB
All DBs
Position
1:complement(1778500..1784415)
Genome browser
AA seq
1971 aa
AA seq
DB search
MSSNGIIKIRGARQHNLKNVDLDVKTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETF
SAYARQFLDRMDRPQVDRVDGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLYARAAE
LFDRKTAHQVRHDTPETIYADLLERTEQDDPRLVVTFPVELPESASEQEVEQWLSASGYT
RVQAQREVDSPTGKRKLLDVVADRFRLRQADKQRVVEAIEASLKRGGGRVNIYVLPPAPE
VQQAPEAQQPEPRIWRFSTGLHSPESDLRYADPQPALFSFNSAYGACEVCRGFGRVIGVD
LGLVIPDARKTLRDGAIKPMQTPAWKECQDDLMRYAAKADIRRGTPWGELTDAERDWVIN
GSPDWNGKWQSHWYGVKRFFEYLESKAYKMHIRVLLSKYRSYTPCETCGGARLKTESLLW
RLGSKANADEVLTPAQRFMPRGVQWNRAQLEALPGLTVHDLMLMPIERIRRFFDEISLPS
ALLDDALKLLLAEVRTRLKYLCDVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLTKTL
FVLDEPSIGLHPRDLNRIVEAMHRLRDAGNTLVVVEHDPSVMLAADRLIDMGPGPGERGG
SIIYDGPPESIRSSGTLTGEYLGGRRHVADAAHWSQRPVDASTPRIVLEGATEHNLHDVT
VEIPLQRLVCVTGVSGSGKSTLLQDVLYPAMARHFGLATESPGAFRNLTGADQVTDVVFV
DQSPIGKTARSNPASYVGAFDEIRKLFAKAPLAQQRGYGPGMFSFNSGDGRCPTCGGSGF
EHIEMQFLSDVYLRCPDCDGRRYRAELLEVKIERGEPARALSIADVLELTVSEAVAYFSK
DAEVLRVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAESAQARTARGAKQAVAK
RLFMFDEPTTGLHFDDIAKLMQAFGKLLASGHSLIVIEHNLDVIRAADWIIDLGPEGGDG
GGRVLCAGTPEDVKSCPESHTGEALLHYDRAMSAAAEPAEAASQGIPLQNALSAARARRA
IEGEDVIRIVNAREHNLKALDVDIPHGKFNVITGVSGSGKSTLAFDILFHEGQRRYLESL
NAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLYVKLGL
QHCIHDGTPVTSQSVESIAAQLLRDHKGQHVGFLAPLVVNRKGVYTDLAKWAKARGNTHL
RVDGEFVPVDPWPKLDRFREHTIELPVADLIVSADNEAELRRALDQTLEVGKGVMHLLAP
LDGLHDAINGGQPTAKLGAVKVLSTKRACPVCGTSYPELDPRMFSYNSKHGWCTTCVGTG
LALTREQRAAYDDTIVVDDNRGREQSLPSEEQEPEGLVDEPCPDCVGTRLNPTARAVTFD
AQAITDVAQWTVSDTRAWIDGLHMTGRDAEIARDVVSEIGSRLQFLEEVGLGYLSLDRAA
PSLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLNALRKLGDKGNTLVVV
EHDEDTIRRADHIIDIGPGAGKRGGTLIAQGSVADLSAQPESLTGQFLATPIVHPLQPRR
KVVAPSKRAAAVPENWLTVHGGKLHNLRNVTVGIPLSRLVAVTGVSGSGKSTLARDVLMA
NLLDAVGRSVLSSPATRRARAAAEEKPAANRRSSVLARTAPRAPLNVTHAWQGCDSITGW
ESIDRVLEVDQTPIGKTPRSCPATYIGVWDAIRKLFAGTLEARARGYTASRFSFNTGEGR
CPACEGQGVRTIGMSFLPDVKVPCDVCHGQRFNPETLAVTWRGKNIGDVLTMEIDEAVEF
FAPISNIAHPLQLMKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDITRRGQKPP
HTLYVLDEPTVGLHMADVAKLIRVLHRLADGGHSVVVIEHDLDVIAEADWIIDLGPEGGV
GGGTIVAATDPEGIVQVRASHTGAALKPVLDRAANDGTRAVPVEAGEGTNG
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatccaacggcatcatcaagattcgcggcgcgcgccagcacaacctcaaaaacgtc
gatctcgacgtgaaaaccggcgaaatgacggtcgttaccggcccgtccgggtctggcaag
tcgagcctcgtgttcgacacgctttacgcggaagggcagcggcgctacgtcgaaacgttt
agcgcctacgcgcggcagttcctcgatcgcatggaccggccgcaagtcgaccgggtcgac
ggcgtgccgcccgccatcgcgatcgaccagaccaatccggtgcgtagttcgcgctccacc
gtcggcaccatgacggagctcaacgaccacctgaagctgctctacgcgcgcgcggccgaa
ctgttcgaccgcaagacggcgcatcaggtgcgtcacgacacgcccgaaacgatctacgcc
gatctgctcgaacgcacggagcaggacgatccgcggctcgtcgtcacgtttccggtcgag
ttgccggagtcggcgtctgagcaagaagtggagcaatggctgtcggcaagcggctacacg
cgcgtgcaggcgcagcgcgaggtcgattcgcctaccggtaagcgcaaactgctggatgtc
gtcgcggaccgcttccggctccgccaggcggacaagcagcgcgtagtcgaggcgatcgag
gcgtcgctcaagcgcggcggcgggcgcgtgaatatttacgtgctgccgccggctcccgaa
gtccagcaggcgcccgaggcgcagcagcccgagccgcgaatctggcgcttctccacgggc
ctgcatagtccggagagcgatctgcgctacgctgacccgcaaccggcgctgttctcgttc
aactcggcctacggcgcgtgcgaggtctgccgcggattcggccgcgtgatcggcgtcgac
ctgggtctcgtgattccagacgcgcgcaagacgctgcgcgacggcgcgatcaagcccatg
caaacaccggcgtggaaggagtgtcaggacgatctgatgcgctacgcggcgaaggccgac
atccgccgcggcacgccgtggggcgaactcacggacgccgagcgtgactgggtgatcaac
ggctcgccagactggaatggcaagtggcaaagccattggtatggcgtcaaacgcttcttc
gaatatctcgaatcgaaagcgtacaagatgcatatccgcgtgctgctgtctaagtaccgc
agctacacgccatgcgaaacctgcggcggcgcgcgcctgaaaaccgaatcgctgctgtgg
cgtctcggcagcaaggcgaatgcagacgaagtgctgacgcccgcgcagcgcttcatgccg
cgcggcgtccaatggaaccgcgcgcagctggaagcgttgccgggcctcaccgtgcacgac
ctgatgctgatgccgatcgagcgcatccgccgcttcttcgacgaaatcagtttgcccagt
gctttgctcgacgacgcgctcaagctgctgctcgccgaagtgcgcacgcgcctcaaatat
ctgtgcgacgtcgggctcggttatctgacgctcgaccgccaaagccgcacgctgtcgggc
ggcgaagtgcagcggatcaatctcacaacggctctcggcacgtcgctcacgaaaacgctg
ttcgtgctcgacgagccgagcatcggcctgcatccgcgagatctgaaccggatcgtcgaa
gcaatgcatcgtctgcgggacgcgggcaatacgctggtggtggtcgagcacgatccgtca
gtcatgctcgcggcggatcgtctgatcgacatgggtccggggccgggcgagcgtggcggc
tcgatcatttacgacggcccgcccgagtcaatccgctcgtcgggcacgctcaccggcgag
tacctcggcggccgccggcacgtggcggacgcggcgcactggtcgcagcgcccggtcgac
gcgagcacgccgcgcatcgtgctcgaaggcgcgaccgaacacaatttgcacgacgtgacg
gtagagattccgttgcagcggctcgtctgcgtgacgggcgtgtcgggctcgggcaaatcc
actttgctgcaagacgtgttgtacccggccatggcgcggcacttcggtctcgccaccgag
tcacccggcgcatttcgcaacctgaccggcgcggaccaggtcaccgacgtcgtgttcgtc
gaccagtcgccgatcggcaagaccgcgcgctcgaatccggccagctacgtgggtgcgttc
gatgaaatccgcaagctgttcgcgaaggcgccgctcgcgcaacaacgcggctatggcccg
ggcatgttcagcttcaattccggcgacgggcgctgcccgacgtgcggcggctcgggtttc
gaacacatcgaaatgcagttcttgagcgacgtgtacttgcgctgtccggactgcgacggc
cgccgttatcgcgcggaactgctggaagtgaagatcgagcgcggcgaaccggcgcgtgcg
ttgagcatcgcagacgtgctggaactgaccgtcagtgaagccgtcgcctatttttcgaag
gatgccgaagtattgcgcgtgctgcagcctatcgtcgacgtgggcctcgaatatgtgaag
ctcggtcagccggtgcccacgttgtcgggcggcgaggcgcagcggctcaaactcgcgggc
tttctcgccgaatccgcgcaggcgcgcactgcgcgcggcgcgaagcaggcagtcgccaaa
cgccttttcatgttcgacgagccgaccaccggcctgcatttcgacgacatcgccaagctg
atgcaggccttcggcaagctgctggcaagcggccattcgctgatcgtgatcgagcacaat
ctcgacgtgatccgcgccgccgactggatcatcgacctcggtcccgaaggcggcgacggc
ggtggccgcgtgctgtgcgccggcacgccggaagacgtcaagagctgccccgaatcgcat
accggcgaagcgctattgcactacgaccgcgcaatgagcgcggccgcggagcctgccgag
gcggcttcgcaaggcattccgttgcagaacgcgctgagcgcggcgcgcgcacgccgcgca
atcgaaggcgaggacgtaatacgcatcgtcaatgcgcgcgagcacaacctgaaagcgctc
gacgtcgacatcccgcatggcaagttcaatgtcatcaccggtgtatccggttcgggcaag
tcgacgctcgctttcgacattcttttccacgaagggcagcgccgctatctcgaatcgctc
aatgcgtacgcgcgttccatcgtgcagcccgcgggccggcccgaggtcgacgccgtgtac
ggcatcccgccgacggtcgcgatcgaacagcgtctgtcgcgcggcggccgcaagagtacg
gtggcgaccacgtccgaggtgtggcatttcctgcgcctgctgtatgtgaagctcggtttg
cagcattgcattcatgacggcacgccggtcacgtcgcaaagcgtcgagtccatcgccgcg
caattgctgcgtgaccataaggggcagcacgtcggcttcctcgctccgctcgtggtgaac
cgcaagggcgtgtacaccgatctcgcgaagtgggcaaaggcacgcggcaatacgcatcta
cgggtggacggcgaattcgtgccggtggacccgtggccgaagctcgaccgcttccgtgag
cacaccattgaattgccggtcgccgacctgatcgtgtcggcggacaacgaagcggaactg
cgtcgcgcgctcgatcagacgctggaagtcggcaagggtgtgatgcatctgctcgcgccg
ctcgacggtctgcatgacgcaataaacggcgggcagcctaccgccaagctcggcgcggtc
aaggtgctctccaccaagcgggcgtgtccggtttgcggcacgagctatcccgaactcgat
ccgcgcatgttctcgtataacagcaagcacggctggtgcacgacctgcgtgggcacgggg
ctcgcgctcacgcgcgagcaacgcgccgcgtacgacgacacgatcgtggtggacgacaat
cgtggccgcgaacaaagtttgccgtcggaagagcaggaacccgaaggtctcgtcgacgaa
ccgtgtccggattgcgtgggcacacgtctgaaccccaccgcgcgcgccgtcacgttcgac
gcgcaagccattaccgacgtcgcccaatggaccgtctccgacacgcgcgcgtggatcgac
gggttgcacatgacaggccgcgacgctgagatcgcgcgcgacgtcgtcagcgagatcggc
agccgtttgcagtttctcgaagaagtcgggctcggttatctgagcctagaccgggcggcg
ccgagcctgtcgggcggcgaggcgcaacgcattcgcctcgccgcgcaactgggcagcaac
ctgcaaggtgtctgctatgtgctggacgagccgaccatcgggctgcatccgcgcgacaat
cagatcctgctgaacgcgctgcgcaagcttggcgacaagggcaatacgctcgtggtcgtc
gagcacgacgaagacacgatccggcgggccgatcacatcatcgacatcgggccgggcgcc
ggcaagcgcggcggcacgctgatcgcgcagggcagcgtggcggatctgtccgcgcagccc
gaatcgctgacggggcagtttctcgcaacgccgatcgtgcatccgttgcagccgcgtcgc
aaagtcgtcgcgccaagcaagcgcgcggcagcggtgcctgagaactggctgaccgtgcac
ggcggcaagctgcacaatctgcgcaacgtcaccgtgggcattccactgtcgcggctcgtc
gcggtgacgggcgtcagcggctcaggcaagtccacgctcgcgcgtgacgtgctcatggcg
aatctgctcgacgcagttgggcgctcggtgttgtcgtcgccggctacgcgtcgggcgcga
gcggcggcagaagagaagcccgccgcgaaccgtcgttcgagcgtgctcgcgcgcaccgcg
ccgcgtgctccgctgaacgtcacgcatgcgtggcagggctgcgactcgatcacgggttgg
gaaagcatcgaccgtgtgctcgaagtcgatcagacgccaatcggcaagacgccgcgctcg
tgtcccgcgacgtacatcggcgtgtgggacgcaattcgcaagctgttcgccggcacgctc
gaagcgcgcgcccggggctacacggcatcgcgcttctcgttcaacaccggcgagggccgt
tgcccagcttgtgaagggcaaggcgtgcggaccatcggcatgagcttcctgccggatgtg
aaggtgccgtgcgatgtctgccacgggcagcgcttcaatccggaaacgctcgcagtgacg
tggcggggcaagaatatcggcgacgtgctcaccatggaaatcgacgaggctgtcgagttc
tttgcgccgatctcgaacattgctcatccgttgcagttgatgaaagacgtggggctcggt
tacctcacgctcggtcagccgtcgcctaccttgtctggcggcgaggcgcagcgcatcaag
ctcgtcacggagttgagcaaggtgcgcgacgacattacgcggcgaggtcaaaaaccgccg
catacgttgtatgtgctcgacgagccgacggtcggcctgcatatggccgacgtcgcgaag
ttgattcgcgtgctgcatcgtctcgctgacggcggccatagcgtcgtggtgatcgaacac
gacctcgatgtgatcgcggaggcggactggatcatcgacctcggtcccgaaggcggcgtg
ggcggcggaacgatcgtcgctgctacggaccccgaaggaatcgtgcaggttcgcgcgagc
cacaccggcgcagcgttaaagcctgtgctcgaccgtgccgcgaatgacggcactcgcgct
gtgcccgtcgaagcgggcgagggcaccaacgggtaa
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