Paraburkholderia kirstenboschensis: RW095_31235
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Entry
RW095_31235 CDS
T09457
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pkf
Paraburkholderia kirstenboschensis
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkf03009
]
RW095_31235
Enzymes [BR:
pkf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
RW095_31235
Ribosome biogenesis [BR:
pkf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RW095_31235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF2239
Motif
Other DBs
NCBI-ProteinID:
WOD20641
LinkDB
All DBs
Position
1:1927680..1928390
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AA seq
236 aa
AA seq
DB search
MNLESILFTQGFGSRRQCRALIGDARVSIGGTVCTDADADFPTDDASFCFSVDGVVWPYR
ERAYLLLNKPAGYECSRDPQHHLSVFSLLPPQFAERGVQCVGRLDQDTTGLLLLSDDGKF
VHMFTSPKRKVPKVYVATTRHAIDDAQLSALRNGVLLHGESKPVAAVEADARGEHALALT
VMEGKYHQVKRMIAAAGNRCEGLHRERVGGLALPATLAPGAWQWLDQTDLGSLRSG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgaaagcattctctttacccagggcttcggctcgcgccgccaatgccgggcg
ctgataggcgacgctcgcgtgagcatcggcggcaccgtatgcaccgacgccgacgccgat
ttccccaccgacgatgcgtcgttctgcttcagcgtcgacggcgtggtttggccatatcgc
gagcgcgcatatctgctgctcaacaagccggccggctacgagtgctcgcgcgatccgcag
catcatctgagcgtattcagtctgttgccgccgcagttcgccgagcgcggcgtgcaatgc
gtcgggcggctcgaccaggacaccaccggcttgctgctgctctccgacgacggcaagttc
gtccacatgttcacgtcgccgaaacgcaaggttccgaaggtgtacgtcgccacaacccgt
catgcgatcgacgacgcgcagttgagcgcgctgcgcaatggcgtgctgctgcacggcgag
tcgaagccggtcgcggcggtagaggccgatgctcgcggcgagcacgcgttggcgctcacg
gtgatggaaggcaagtatcaccaggtcaagcggatgatcgcggcggccggcaaccgttgc
gaagggctgcatcgcgagcgcgttggcggactcgctttgcccgcgaccctcgcgccgggc
gcgtggcaatggctcgaccagaccgacctcggatctttacggagcgggtaa
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