Paraburkholderia kirstenboschensis: RW095_33660
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Entry
RW095_33660 CDS
T09457
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf00300
Lysine biosynthesis
pkf00470
D-Amino acid metabolism
pkf01100
Metabolic pathways
pkf01110
Biosynthesis of secondary metabolites
pkf01120
Microbial metabolism in diverse environments
pkf01230
Biosynthesis of amino acids
Module
pkf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RW095_33660 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RW095_33660 (lysA)
Enzymes [BR:
pkf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RW095_33660 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
S-methyl_trans
SH3BP5
Motif
Other DBs
NCBI-ProteinID:
WOD17732
UniProt:
A0ABZ0EN27
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All DBs
Position
1:2453942..2455204
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AA seq
420 aa
AA seq
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MTRPAFDYVNGVLHVEGVSAVSLAEQFGTPLYVYSRAALTDAWNAYAGACAGRRASVHVA
VKANSNLGVLNVFARLGAGFDIVSGGELARVLAAGGKAENTVFSGVGKHSNEMREALAAG
VKCFNVESIPELDRLNAVAAEMGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFEEA
RATYQAAAAMANLEVVGIDCHIGSQITEVAPYLDAVDKVLELVEQIEKDGIAIRHIDVGG
GLGITYDDETPPDIGEFVRTVLDRIEARGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPG
AEKNFAIVDAAMTELARPAMYEAYHAIDAVVERDVPAHVYDVVGPVCESGDWLGRERLLS
VEPGDLLAIRSAGAYGFVMSSNYNTRPRAAEVMVDGTQAHVVRAREEVQQLFAGETVLPV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgactcgacctgcatttgactacgtcaacggcgtgcttcacgtcgaaggcgtgtccgcc
gtttcgctcgccgaacagttcggcacgccgctttatgtgtactctcgggccgcgctcacc
gacgcgtggaacgcgtacgcgggcgcgtgcgccggccgtcgcgcgagcgtgcacgtggct
gtgaaggccaatagcaatctcggggtgctgaacgtgttcgcgcgtctcggcgcgggcttc
gacatcgtctcgggcggtgaactggctcgcgtgctggcagccggtggcaaagcggaaaac
actgtgttttccggcgtcggcaaacactcgaacgaaatgcgcgaggcgctcgcggcgggc
gtcaagtgcttcaatgtcgaatccattccggagctcgatcgcctgaacgcggtggccgcc
gaaatgggcaagaaggcgccggtttcgctgcgcgtgaatcccgacgtcgatgcgaagacg
catccgtacatctccacggggctgaagtcgaacaagttcggcgtcgcgttcgaagaggcg
cgcgccacgtatcaggcggcagcagccatggcgaaccttgaggttgtcgggatcgactgc
catatcggctcgcagataacagaagtcgcgccttatctggacgcagtggacaaggttctg
gaactggtcgaacagatcgagaaggacggcattgcgattcgtcatatcgacgtgggcggc
ggcctcggcatcacctacgacgacgaaacgccgccggacatcggcgagttcgtacgcacg
gtgctcgatcgcatcgaggcgcggggtcacggccatcgcgaagtgtatttcgagccgggc
cgctcgctagttgggaatgccggcgtactgctcacgcgcgtcgaattcctgaagccgggc
gctgagaagaatttcgctatcgtcgacgcggccatgaccgaactcgcccgcccggcgatg
tacgaggcgtaccacgctatcgacgccgtcgttgagcgcgacgtgcccgcgcatgtgtac
gacgtcgtcggaccggtgtgcgaaagcggcgactggctggggcgcgaacggctgctctcc
gtcgagccgggcgacctgctcgcgattcgctcggccggcgcctacggcttcgtgatgagt
tcgaactacaacacccgcccgcgtgcagcggaggtgatggttgatggtacacaagcgcac
gtagtccgcgcgcgagaagaagtccagcagttgtttgcgggcgaaacggttttgccggtg
taa
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