Paraburkholderia kirstenboschensis: RW095_35215
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Entry
RW095_35215 CDS
T09457
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pkf
Paraburkholderia kirstenboschensis
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkf03032
]
RW095_35215 (gyrB)
03400 DNA repair and recombination proteins [BR:
pkf03400
]
RW095_35215 (gyrB)
Enzymes [BR:
pkf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RW095_35215 (gyrB)
DNA replication proteins [BR:
pkf03032
]
Prokaryotic type
DNA Topoisomerases
RW095_35215 (gyrB)
DNA repair and recombination proteins [BR:
pkf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RW095_35215 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WOD18023
LinkDB
All DBs
Position
1:2793343..2795814
Genome browser
AA seq
823 aa
AA seq
DB search
MTETNNTQPDNSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEAL
AGYCNDIQVIIHADNSISITDNGRGVPTGLKMDDKHEPKRSAAEIVMTELHAGGKFDQNS
YKVSGGLHGVGVSCVNALSAWLRLTVRRDGKKHFMEFHRGVPQNRVIEEIGGIAVSPIQV
VGETENRGTEVHFMADETIFGNVEYHYDILAKRIRELSFLNNGVRIRLTDQRSGKEDDFA
FVGGVKGFVEYINKTKSVLHPTIFHVNGEKDGVGVEVAMQWNDSYNENVLCFTNNIPQRD
GGTHLTGLRAAMTRVLNKYIADHEVAKKAKVETSGDDMREGLSCVLSVKVPEPKFSAQTK
DKLVSSEVRAPVEDVVAKALEEFLLETPNDAKIICSKIVDAARARDAARKAREMTRRKGV
LDGVGLPGKLADCQEKDPAKSEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKAR
YDKLLSSEQIVTLITALGCGIGKEDYNLDKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQ
MPEMIERGYIYIAQPPLYKIKAGKDERYLKDENEVNAHILKLALQGSELLPSENATAITG
DALGELARAYLLAQAVVNRLSRLYDAGALEAVMDGVVIDLSSEDAAEASAKALEAKLRDD
ALKPEVTVTTMYDPVRELRSLRVARTHHGNQKVSVLDEEFQLTADYQQLVNTANTFKGLI
GPGAVIKRGERSMAVGDFKSAMKWLLADAERNVSKQRYKGLGEMNPGQLWETTMDPAVRR
LLRVQIEDAIAADGIFTTLMGDDVEPRRAFIESNALRAGNIDV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacgaacaatacgcaacccgataacagctacggcgcctcgtccattcagatc
ctcgaaggtctggaggcggtgcgcaagcggccggggatgtacatcggggatacatcggat
ggcaccggtttgcaccacctcgtgttcgaagtgctcgacaactcgatcgacgaggcgttg
gccggttactgtaacgacattcaggtgatcattcacgccgacaactccatctcgatcacc
gacaacggccgcggcgtgccgaccggcctgaagatggacgacaagcacgagccgaagcgc
agtgccgccgaaatcgtgatgaccgaactgcatgccggcggcaagttcgaccagaacagc
tacaaggtgtcgggcggcctgcacggcgtgggcgtgtcgtgcgtgaacgcactgtccgcg
tggctgcgtcttacggttcgccgcgacggcaagaagcacttcatggaattccaccgtggc
gtgccgcagaaccgcgtgatcgaagagatcggcggcatcgcggtgtcgcctatccaggtg
gtgggcgagaccgaaaaccgcggcaccgaagtgcacttcatggcggacgagacgatcttc
ggcaacgtcgaatatcactacgacattctggccaagcgaattcgcgaactgtcgttcctg
aataacggcgtgcggattcgtttgacggatcagcgttcgggcaaggaagacgatttcgcg
tttgtcggcggcgtgaagggttttgtcgagtacatcaacaagaccaagagcgtgctgcac
ccgaccattttccacgtgaacggcgagaaggacggcgtgggcgtggaagtggcgatgcag
tggaacgacagctacaacgaaaacgtgctttgcttcacgaacaacattccgcagcgcgac
ggcggcacgcacttgaccggtttgcgcgcagcgatgacgcgcgtgttgaacaagtacatt
gccgaccatgaagtcgcgaagaaagcgaaggtcgagacgtcgggcgacgacatgcgcgaa
gggctttcgtgcgtgctgtcggtgaaggtgccggagccgaagttcagcgcgcagacgaag
gacaagctggtgtcgtccgaagtgcgcgcgccggtggaagatgtggtcgcgaaggcgctg
gaggaattcctgcttgagacgccgaacgacgcgaagatcatctgcagcaagatcgtcgat
gcagcgcgtgctcgcgatgcggcccgcaaggcgcgtgaaatgacgcgtcgcaagggcgtg
ctcgatggcgttggtttgccgggcaagctcgcggattgccaggaaaaagatccggcgaag
tcggagatttatatcgtcgagggcgattcggcaggcgggtccgcgaagcagggacgcgac
cggaagtttcaggcgatcttgccgctgcgcggcaaggtgctcaacgtggagaaagcgcgt
tatgacaagctgctttcttcggagcagatcgtgacgctgattaccgcgttgggttgcggt
atcggcaaagaggattacaacctcgacaagctgcgttatcaccgcatcatcatcatgacc
gacgctgacgtggacggcgcgcacatccggacgctgctgctgacgttcttctatcggcaa
atgccggagatgatcgagcgcgggtatatctatatcgcgcagccgccgctgtacaaaatc
aaggcgggtaaggacgagcggtatctgaaggatgagaatgaggtcaatgctcatatcttg
aagctggcgttgcagggttcggagttgttgccttctgagaacgcgactgcgattaccggc
gatgcgttgggcgagttggcacgggcttatctgcttgcgcaggcggtggtcaaccggttg
agcaggctgtatgacgctggggcgctcgaggctgtgatggatggcgttgtcatcgatctc
tctagcgaagatgcggctgaggcttctgcaaaggcgctcgaggctaagctgcgggatgac
gcgctgaagcccgaagttaccgttacgacgatgtatgacccggtgcgcgaattgcgttcg
ctgcgcgtcgcgaggacgcatcacgggaatcagaaggtttcggtgctggacgaggagttt
cagttgacggctgattatcagcaactggtcaataccgctaatacgtttaaggggctaatt
ggtccgggcgcggtgatcaagcgtggtgagcggagtatggctgttggcgacttcaagtct
gctatgaagtggttgttggctgatgctgagcggaatgtttccaagcagcgctataagggg
cttggtgagatgaatcctgggcagctttgggagacgactatggatccggctgtgcgtcgt
ttgctgagagtgcagatcgaggacgctattgcggctgacgggatctttactacgctcatg
ggcgatgatgtggagccgcggcgggcgtttattgagtctaatgcgcttagggcggggaat
attgatgtttga
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