Paraburkholderia kirstenboschensis: RW095_35315
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Entry
RW095_35315 CDS
T09457
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pkf
Paraburkholderia kirstenboschensis
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkf03009
]
RW095_35315 (dbpA)
Enzymes [BR:
pkf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
RW095_35315 (dbpA)
Ribosome biogenesis [BR:
pkf03009
]
Prokaryotic type
rRNA helicases
RW095_35315 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
WOD18040
LinkDB
All DBs
Position
1:2814076..2815479
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AA seq
467 aa
AA seq
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MNSHTTAGAPFSQLPLPSAALANLTQLGYVEMTPIQAASLPIALAGHDLIAQAKTGSGKT
AAFSLALLARLDVRNFAVQAMVLCPTRELADQVTQEIRRLARAEENIKVLTLCGGTPMRP
QTASLEHGAHIVVGTPGRIMDHLERGSLPLQSLNTLVLDEADRMLDMGFFDDIATVVKQC
PKERQTLLFSATYPEGIVKLSQQFLRNPKEVKLAERHDNTKIRQRFYEVTEDERLHAVGL
LLNHYRPVSTLAFCNTKQQCRDLLDVLRAQGFHALALHGELDQRERDQVLIQFANRSCSV
LVATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQEGWALSLASMNEMGRVG
SLEQAQKREVEWHKLSELTAASNEPLLPPMETLQILGGRKEKIRPGDVLGALTGEAGFAG
SQIGKINVTEMSTYVAIERSVARDAVRKLSAGKVKGKKVKVRLMDDA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtcacaccaccgccggcgctccgtttagtcagttgccgctgccgtccgccgcg
ctcgcgaatcttacgcaactcggctatgtcgagatgacgcccatccaggctgcgagcttg
cccatcgcgctcgccggccacgatctgatcgcgcaggcgaaaaccggcagcggcaagacc
gcggcgttttcgctggcgctgctcgcgcgtctcgacgtgcgcaacttcgccgtgcaggcc
atggtgctatgtccgacgcgcgaactcgccgatcaggtcacgcaggagatccgccgtctc
gcgcgcgcggaagaaaacatcaaggtgctgaccttgtgcggcggcacgccgatgcgtccg
caaaccgcgagcctcgaacacggcgcgcatatcgtcgtcggcacgccgggccgcatcatg
gatcacctcgagcgcggcagcctgcctctgcagtcgctgaacacgctcgtgctggacgaa
gccgaccgcatgctcgacatgggtttcttcgacgacatcgcgacggtcgtcaagcaatgt
ccgaaggagcggcagacgctgcttttctcggccacctaccctgaaggtatcgtcaagctc
agtcagcaattcctacggaatccgaaggaagtgaagcttgccgaacggcacgacaatacg
aagatccgccaacgcttctatgaagtgaccgaggacgaacgtctgcatgccgtcggcctg
ttgttgaaccactatcgcccggtgagcacgctggctttctgcaataccaagcagcaatgc
cgcgatctgctggacgttttgcgcgcccagggttttcatgcgctcgcgctgcatggcgaa
ctcgatcaacgcgaacgcgatcaggtgctgatccagtttgcaaaccgcagctgctcggtg
ctggtcgcgaccgacgtcgcggcgcgtggcctcgacatcgcgcaactggaagcagtgatc
aacgtcgacgtaacgcccgatccggaggtgcatgtgcatcgtattggccgcacggggcgt
gccgatcaggagggctgggcgttgagcctcgcgagcatgaacgagatggggcgcgtcggc
agtctggagcaggcgcaaaagcgcgaagtcgaatggcacaagctctccgaactgacggcg
gccagcaatgagccgctattgccgccgatggaaacgctgcagattctcggcggccgcaag
gagaaaatccgtcccggcgacgtgctcggcgcgctgactggcgaggcgggtttcgccggc
tcccagataggcaagatcaacgtgaccgagatgtcgacatatgtggcgatcgaacgcagc
gttgcgcgagacgcggtgcgcaagctgagcgcgggcaaggtgaagggcaagaaggtcaag
gtccgcttgatggacgacgcctga
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