Paraburkholderia kirstenboschensis: RW095_35610
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Entry
RW095_35610 CDS
T09457
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf00300
Lysine biosynthesis
pkf00470
D-Amino acid metabolism
pkf01100
Metabolic pathways
pkf01110
Biosynthesis of secondary metabolites
pkf01120
Microbial metabolism in diverse environments
pkf01230
Biosynthesis of amino acids
Module
pkf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RW095_35610 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RW095_35610 (dapF)
Enzymes [BR:
pkf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RW095_35610 (dapF)
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Motif
Pfam:
DAP_epimerase
TAL_effector
CitF
Motif
Other DBs
NCBI-ProteinID:
WOD18094
UniProt:
A0ABZ0ELP1
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All DBs
Position
1:complement(2879330..2880193)
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AA seq
287 aa
AA seq
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MKLKFTKMHGAGNDFVVLDGHTQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVEGVDF
RYRIFNCDGGEVEHCGNGARCFVKFVRDSGLTDQRSVRVQVQNGTITLTMQENGEVLVDM
GAPVFDAERVPFATKGLEGRREGADTLWPLDVNGTTRWISVVSMGNPHAVQVVDDVEEFP
VLVEGPVIERHARFPQRVNAGFMQIVGRSEIKLRVYERGAGETLACGTGACAAVAAGIRR
GLLDAPVLVHTHGGKLTITWDSKHPNEPLLMAGPATTVFQGEIELAD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaattcaccaaaatgcacggcgcgggcaacgacttcgtcgtgctcgacggc
cacacccaaccggtcaacctgacgccggcgcaggtgcgcgcgctcgcggaccggcatttt
ggcgtgggcgccgaccagcttctgctggtcgagaagccgacggtagaaggcgtcgatttc
agatatcgcatcttcaattgcgacggcggcgaagtcgaacattgcggcaacggcgcacgc
tgcttcgtgaagttcgtccgcgacagcggcctcaccgatcagcgcagcgtgcgcgtgcag
gtccagaacggcacgatcacgctgaccatgcaggaaaacggcgaagtgctggtcgatatg
ggcgcgccggtgttcgacgcggaacgcgtacctttcgctaccaaaggtctcgaagggcgc
cgcgaaggcgcggacacgctgtggccgctcgacgtcaacggcaccacgcgctggatttcg
gtcgtgtcgatgggcaatccgcacgcagtgcaagtcgtcgacgacgtggaggagtttccc
gtgctcgtcgaaggtccggtgatcgagcggcacgcacgtttcccgcagcgagtgaacgcg
ggcttcatgcagatcgtcggtcgcagcgaaatcaaactgcgcgtgtatgagcgcggtgcc
ggtgaaacgctggcatgcggcacgggcgcgtgcgcggcggtcgcagcgggcattcgccgc
ggactgctcgacgcgccggtgctcgtccatacgcatggcggcaagctcaccatcacatgg
gacagcaagcatccaaacgagcctctgctgatggcaggccccgcgacaaccgtttttcag
ggcgagatcgaactggccgactga
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