KEGG   Paraburkholderia kirstenboschensis: RW095_35610
Entry
RW095_35610       CDS       T09457                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pkf  Paraburkholderia kirstenboschensis
Pathway
pkf00300  Lysine biosynthesis
pkf00470  D-Amino acid metabolism
pkf01100  Metabolic pathways
pkf01110  Biosynthesis of secondary metabolites
pkf01120  Microbial metabolism in diverse environments
pkf01230  Biosynthesis of amino acids
Module
pkf_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pkf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RW095_35610 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RW095_35610 (dapF)
Enzymes [BR:pkf01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     RW095_35610 (dapF)
SSDB
Motif
Pfam: DAP_epimerase TAL_effector CitF
Other DBs
NCBI-ProteinID: WOD18094
UniProt: A0ABZ0ELP1
LinkDB
Position
1:complement(2879330..2880193)
AA seq 287 aa
MKLKFTKMHGAGNDFVVLDGHTQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVEGVDF
RYRIFNCDGGEVEHCGNGARCFVKFVRDSGLTDQRSVRVQVQNGTITLTMQENGEVLVDM
GAPVFDAERVPFATKGLEGRREGADTLWPLDVNGTTRWISVVSMGNPHAVQVVDDVEEFP
VLVEGPVIERHARFPQRVNAGFMQIVGRSEIKLRVYERGAGETLACGTGACAAVAAGIRR
GLLDAPVLVHTHGGKLTITWDSKHPNEPLLMAGPATTVFQGEIELAD
NT seq 864 nt   +upstreamnt  +downstreamnt
atgaaactgaaattcaccaaaatgcacggcgcgggcaacgacttcgtcgtgctcgacggc
cacacccaaccggtcaacctgacgccggcgcaggtgcgcgcgctcgcggaccggcatttt
ggcgtgggcgccgaccagcttctgctggtcgagaagccgacggtagaaggcgtcgatttc
agatatcgcatcttcaattgcgacggcggcgaagtcgaacattgcggcaacggcgcacgc
tgcttcgtgaagttcgtccgcgacagcggcctcaccgatcagcgcagcgtgcgcgtgcag
gtccagaacggcacgatcacgctgaccatgcaggaaaacggcgaagtgctggtcgatatg
ggcgcgccggtgttcgacgcggaacgcgtacctttcgctaccaaaggtctcgaagggcgc
cgcgaaggcgcggacacgctgtggccgctcgacgtcaacggcaccacgcgctggatttcg
gtcgtgtcgatgggcaatccgcacgcagtgcaagtcgtcgacgacgtggaggagtttccc
gtgctcgtcgaaggtccggtgatcgagcggcacgcacgtttcccgcagcgagtgaacgcg
ggcttcatgcagatcgtcggtcgcagcgaaatcaaactgcgcgtgtatgagcgcggtgcc
ggtgaaacgctggcatgcggcacgggcgcgtgcgcggcggtcgcagcgggcattcgccgc
ggactgctcgacgcgccggtgctcgtccatacgcatggcggcaagctcaccatcacatgg
gacagcaagcatccaaacgagcctctgctgatggcaggccccgcgacaaccgtttttcag
ggcgagatcgaactggccgactga

DBGET integrated database retrieval system