Paraburkholderia kirstenboschensis: RW095_37665
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Entry
RW095_37665 CDS
T09457
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RW095_37665 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkf03019
]
RW095_37665 (pcnB)
Enzymes [BR:
pkf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RW095_37665 (pcnB)
Messenger RNA biogenesis [BR:
pkf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RW095_37665 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
WOD18486
LinkDB
All DBs
Position
1:complement(3350263..3351861)
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AA seq
532 aa
AA seq
DB search
MIKKLIRKLFGQDTASADDTVPAEADSDEPGSAPARNAAGAAGTGRARRKPARNGVPAKT
VRDPDVPVIIPHDVHGIDPTLISRSAIRVTEGLQQAGHRAFIVGGAVRDLLLGIKPKDFD
VATDATPEQVQKLFRRARIIGRRFQIVHVQFGQEIIETSTFRALVDPPAADAAPPRRLKR
DELDRRTHAVDASGRVLRDNVWGEQHEDATRRDFTINAMYYDPATETVLDYHNGMADVRA
RLLRMIGDPATRYREDPVRMLRVVRFAAKLDFEIEDATRAPIAEMADLINNVPAARLFDE
MLKLMLSGHALACLKRLRQEGLHHGLLPLLDVVLEQPTGEKFITLALTNTDARVRAGKPV
SPGFLFATLLWHDVQQRWQKFEANGEYPVPALHRAMDEVLDMQTEKLAIHKRFSSDMREI
WGLQLRLEKRSGRSALKLLEHQRFRAGHDFLLLRCESGELDESVGAWWTEFIEGDIAARE
TLLTQGGKDRSPRKRRRRSSGARNRKPGDGMEGGTPAERTDAEAGHEGPHED
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaaaaactcatccgtaagctattcggccaggacacagcgtccgccgacgacacc
gtgccggctgaagccgactcagacgaacccggcagcgcaccggcacgcaatgcagcaggc
gccgcgggaaccggccgcgcgcgccgcaagccggcccgcaatggcgtgcccgcaaagaca
gtgcgcgacccggacgtgccggtcatcattccgcacgacgtacacggcatcgaccccacg
ctgatctcgcgcagcgcgattcgcgtgaccgaaggcctgcaacaggccgggcaccgcgcg
ttcatcgtcggcggtgcggtgcgcgacctgctgctcggcatcaagccgaaagacttcgac
gtggcgaccgacgccacgcccgaacaggtgcagaagctgttccgccgcgcgcgcatcatt
ggccgcaggtttcagatcgtgcacgtgcagttcggccaggaaatcatcgaaacctccacg
ttccgcgcgctggtcgatccgcccgccgctgacgccgcgccgccgcggcgcctgaagcgc
gacgagctcgaccgccgcacgcacgcggtggacgcaagcggccgcgtgctgcgcgacaac
gtgtggggcgagcagcacgaagacgccacgcgccgcgacttcacgatcaatgcgatgtac
tacgatccggccaccgaaacagtgctggattatcacaacggcatggcggacgtgcgcgct
cgcctgctgcgcatgatcggcgatccggccacgcgttatcgcgaagatcctgtgcgcatg
ctgcgcgtggtgcgttttgcggcgaagctcgacttcgagatcgaagacgcgactcgcgcg
ccgatcgccgaaatggccgacctgatcaacaacgtgccggccgcgcgtctgttcgacgag
atgctgaagctcatgctgtccggccacgcgctcgcctgcttgaagcgcctgcgccaggaa
ggcctgcatcatggtttgctgcccttgctcgacgtcgtgctcgagcagcccaccggcgaa
aaattcatcacgctcgcgctcaccaacaccgacgcacgcgtgcgcgctggcaagccggtg
tcaccaggcttcctgttcgccacgctgctctggcacgacgtgcagcagcgctggcagaaa
tttgaagcgaacggtgagtatccggtgccggcgctgcatcgcgcgatggacgaagtcctc
gacatgcagacggaaaaactcgctattcacaagcgtttttcgtccgatatgcgcgagatc
tggggcttgcagctgcgcctcgaaaaacgctcgggaagaagcgcgctgaagctgctggaa
caccaaagatttagagcggggcatgatttcctcctgttgcgctgcgaatcgggcgaactc
gatgagtcggtcggagcgtggtggacggagttcatcgaaggagatatcgcggcgcgtgaa
acattgctaacgcaaggcgggaaggaccgaagccccagaaaacgacggaggcgcagcagt
ggcgcgagaaaccgcaaaccgggcgacggaatggagggcggcacgccagccgaacgcaca
gacgccgaagcgggccatgaaggcccgcacgaagactga
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