Paraburkholderia kirstenboschensis: RW095_38910
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Entry
RW095_38910 CDS
T09457
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf00521
Streptomycin biosynthesis
pkf00523
Polyketide sugar unit biosynthesis
pkf00541
Biosynthesis of various nucleotide sugars
pkf01100
Metabolic pathways
pkf01110
Biosynthesis of secondary metabolites
pkf01250
Biosynthesis of nucleotide sugars
Module
pkf_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RW095_38910 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RW095_38910 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RW095_38910 (rfbC)
Enzymes [BR:
pkf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RW095_38910 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WOD18674
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Position
1:3614745..3615296
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AA seq
183 aa
AA seq
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MNLTVIRTALPEVVTLEPKVFGDDRGFFFESFNAREFSEGTGIERNFVQDNHSRSARKVL
RGLHYQIQQPQGKLVRVTSGLVFDVAVDVRRSSPNFGKWVGVELSDQNKRQLWIPEGFAH
GFVVLSEFAEFLYKTTDYYAPEYERSLAWNDPVIGIEWPFEGEPLLSKKDASAPALANAE
LFN
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaccgttatccgcactgcgcttccggaagtcgtgactctggagcccaaagtg
ttcggcgacgaccgcggcttctttttcgaaagtttcaatgctcgcgaattttccgaaggt
acgggcattgagcgcaacttcgttcaggacaatcactcccgttctgcgcgcaaggtgttg
cgcgggttgcattatcaaatccagcagccgcagggcaagctggttcgcgtgacgagcggc
ttggtttttgatgtcgctgtcgatgtccgtcgtagttctccgaacttcggcaaatgggtt
ggcgtcgagttgtccgatcagaataagcggcagttatggattccggaggggttcgcgcac
ggtttcgtcgtgctgtcggaatttgccgagttcctgtataagacgaccgattattacgcg
ccagagtacgagcgctcattggcgtggaacgatcccgtcattggaattgaatggccgttc
gagggtgagccgctgctgtcgaagaaagatgcttcagcgcctgcacttgccaacgccgaa
ttatttaactag
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