Paraburkholderia kirstenboschensis: RW095_39550
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Entry
RW095_39550 CDS
T09457
Name
(GenBank) arginine/lysine/ornithine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf00330
Arginine and proline metabolism
pkf01100
Metabolic pathways
pkf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RW095_39550
Enzymes [BR:
pkf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
RW095_39550
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
SPACA9
SP2_C
Motif
Other DBs
NCBI-ProteinID:
WOD18791
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All DBs
Position
1:3764249..3766534
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AA seq
761 aa
AA seq
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MKFRFPVVIIDEDFRSENISGSGIRALAEAIEKEGAEVLGLTSYGDLTSFAQQSSRASCF
ILSIDDDELLPYVENVVVEGETPELAAAIVALRAFVTEVRRRNADIPIFLYGETRTSRHL
PNDILRELHGFIHMFEDTPEFVARHIIRETKVYLDSLAPPFFKELVQYAEEGSYSWHCPG
HSGGVAFLKSPLGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFSAD
HVFFVTNGTSTSNKIVWHGTVAPGDIVLVDRNCHKSILHAITMTGAIPVFLTPTRNNFGI
IGPIPRSEFEPENIRKKIEANPFAREALAKNPNLKPRILTITQSTYDGVIYNVEMIKEML
GEWLDTLHFDEAWLPHAEFHEFYQDMHAIGAGRPRIGAMVFATHSTHKLLAGISQASQIV
VQDSKNSRFDKHRFNEAYLMHTSTSPQYAIIASCDVAAAMMEAPGGTALVEESIAEALDF
RRAMTKVDTEYGDDWFFKVWGPDQFADEGIGSREDWMLRPNDSWHGFGPLAEGFNMLDPI
KATIVTPGLDMDGGFGETGIPAAIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSM
VTELQQFKDDYDNNQPLWRVLPDFVALHPTYERVGLRDLCQQIHSVYRANDIARLTTEMY
LSSMEPAMKPSDAFAKLAHREIDRVPIDELEGRVTSILLTPYPPGIPLLIPGERFNKTIV
NYLRFAREFNERFPGFHTDIHGLVGEMINGRIEYFVDCVRV
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaagttccgttttcccgtcgtcatcatcgacgaagatttccgctccgagaacatctcg
ggttccggcattcgggctttggccgaagcaatcgagaaagaaggcgcggaagtgctcggg
ttgacgagctacggcgatctgacttcgttcgcgcagcagtcgagccgcgcgtcgtgcttc
atcctttcgatcgacgacgacgagctgctgccctacgtcgaaaacgtcgtggttgaaggg
gaaacgccggagttggcggccgcgatcgtcgcgctgcgcgcgttcgtgacggaagtgcgc
cgccgcaacgccgacattccgatcttcctgtacggcgaaacgcgtacttctcgccacttg
cctaacgacatcctgcgcgaattgcacggcttcatccacatgttcgaggacacgccggag
ttcgtcgcgcgccatatcatccgcgaaacgaaggtttatctggattcgctcgcgccgccg
ttcttcaaggaactggtgcagtacgccgaagaaggctcgtactcgtggcactgtcctggc
cactcggggggcgtcgcgttcctgaagagtccgctcggtcagatgttccatcagttcttc
ggcgagaacatgctgcgcgcggacgtctgcaacgccgtcgacgaactcgggcaactgctc
gaccacaccggccccgttgcggcctccgagcgcaacgccgcgcgcatcttcagcgcagac
catgtgttcttcgtgaccaacggcacgtcgacctcgaacaagatcgtctggcacggcacg
gtcgcgccgggcgacatcgtattggtggaccgcaactgccacaagtcgatcctgcacgcg
atcacgatgaccggcgcgattccggtgttcctcacgccgacgcgcaacaacttcggcatc
atcggtccgattccgcgttcggagttcgagccggaaaacatccgcaagaagatcgaggcg
aatccgttcgcccgcgaagcgctcgcgaagaacccgaacctgaagccgcgcattctgacg
atcacccaaagcacgtacgacggcgtgatctacaacgtcgagatgatcaaggaaatgttg
ggcgaatggctcgacacgctccacttcgacgaagcgtggctgccgcatgccgaattccac
gagttctatcaggacatgcacgcgatcggcgcgggccgtccgcgcatcggcgcaatggtc
tttgccacgcactccacgcacaagctgctggccggcatttcgcaagcttcgcagatcgtc
gtgcaggattcgaagaacagccgcttcgacaagcatcggttcaacgaggcgtatctgatg
catacgtcgacgagcccgcaatacgcgatcatcgcgtcgtgcgacgtggccgcggccatg
atggaagcgcccggcggcaccgctctcgtcgaagagtcgattgcggaagcgctggacttc
cgccgcgcgatgaccaaggtcgacaccgaatacggcgacgactggttcttcaaggtctgg
ggcccggaccagttcgccgacgaaggtatcggttcgcgcgaagactggatgctgcgcccg
aacgattcgtggcacggtttcggaccgctcgccgaaggcttcaacatgctcgatccgatc
aaggcgactatcgtcacgccgggtctggacatggacggcggtttcggcgagacgggcatt
ccggctgcgatcgtgaccaagtatctggccgagcacggcatcatcgtcgagaagaccggg
ctgtattcgttcttcatcatgttcacgatcggcatcacgaagggccgctggaattcgatg
gtgaccgaactccagcagttcaaggacgactacgacaacaaccagccgttgtggcgcgtg
ttgccggacttcgtcgcgctgcatccgacgtatgagcgcgtcggtttgcgcgacctgtgc
cagcagatccacagcgtctaccgcgcgaacgacattgcgcgtctcacgaccgagatgtac
ctgtcgagcatggagccggcgatgaagccgtccgacgcgttcgcgaagctcgcgcaccgt
gagatcgaccgcgtgcccatcgacgaactcgaaggccgcgtgacgtcgattctgttgacg
ccgtacccgccgggcattccactgctcattccgggcgagcgctttaacaagaccatcgtc
aactatctgcgtttcgcgcgtgaattcaacgagcgcttcccgggtttccacacggacatt
cacgggctcgtcggcgagatgatcaacggacgcatcgagtatttcgtcgattgcgtgcgc
gtctga
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