Paraburkholderia kirstenboschensis: RW095_40030
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Entry
RW095_40030 CDS
T09457
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf00270
Cysteine and methionine metabolism
pkf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RW095_40030 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkf03000
]
RW095_40030 (dcm)
03032 DNA replication proteins [BR:
pkf03032
]
RW095_40030 (dcm)
03036 Chromosome and associated proteins [BR:
pkf03036
]
RW095_40030 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pkf02048
]
RW095_40030 (dcm)
Enzymes [BR:
pkf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
RW095_40030 (dcm)
Transcription factors [BR:
pkf03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
RW095_40030 (dcm)
DNA replication proteins [BR:
pkf03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
RW095_40030 (dcm)
Chromosome and associated proteins [BR:
pkf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
RW095_40030 (dcm)
Prokaryotic defense system [BR:
pkf02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
RW095_40030 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
HTH_23
HTH_29
HTH_3
HTH_36
Sigma70_r4_2
HTH_38
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WOD18874
UniProt:
A0ABZ0ENX0
LinkDB
All DBs
Position
1:complement(3869671..3870945)
Genome browser
AA seq
424 aa
AA seq
DB search
MTMATRHDLLLQALQVYSQGEIAARCGKDVRTIRRWKTDQSCPRIAEAALREMLHTSARK
ALAESRADFQFIDLFAGIGGIRRGFEAHGGQCVFTSEWNEFSKKTYRQNHPDADHVHEFI
GDIVSFAEDAVPPHDVLLAGFPCQPFSIAGVSKKNSLGRPHGFECTTQGTLFYDVARIID
AKRPVAFLLENVKNLLSHDKGNTFRTILEVLRDELKYDVHYKVIDGQHFTPQHRERIVIV
GFREETEFSFDDLRLPANGPHLASILHRTDGSEPVLPHDGERFFDPVRRKVQPKYTLTPK
LWAYLQAYADKHRAAGNGFGFGLVTPASVTRTLSARYHKDGSEILLAQGEGERPRRLTPR
ECARLMGFPDDFVIPVSDTQAYRQFGNSVVVPVMHEVARIMTPHVKALLEEDREPASTEV
LLRA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggccacacggcacgacctgctcttacaagcgttgcaggtctacagtcaggga
gaaatcgcggcgcgctgcggaaaagacgtcagaaccattcgccgctggaaaacggaccaa
agttgtccccgcatcgccgaagcggctttgcgtgagatgctgcatacgagtgcgcgcaag
gcgctcgcagaaagccgggcggatttccagttcatcgacctttttgcaggcatcggcggg
attcgccggggcttcgaggcgcacggcggtcaatgcgtgttcacgagcgagtggaacgag
ttctccaaaaagacgtaccggcaaaatcatccggacgccgaccacgtgcacgaattcatc
ggcgacatcgtctcctttgcagaagatgcggttccgccgcacgacgtgctgctcgcgggc
ttcccgtgtcagcccttcagcatcgcgggtgtgagcaagaaaaattcgcttggccgtccg
catggcttcgagtgcacgacgcaaggcacgctcttttacgacgttgcgcgcatcatcgat
gcaaagcgcccggtcgcgttcctgctcgaaaacgtcaagaacctgctgtcgcacgataaa
ggcaacaccttcagaacaattctcgaagtgctgcgcgacgagctgaagtacgacgttcac
tacaaggtcatcgacgggcagcacttcacgccgcagcaccgggaacgaatcgtcatcgtc
ggtttccgcgaggagaccgagttttcgttcgacgatctgcgcttaccggctaacgggcca
caccttgcgtcgattttgcacaggacagatggcagcgagcctgtgctgccgcacgacggc
gagcgtttcttcgaccccgtccgccgcaaggttcagccgaagtacacgctcacgccgaaa
ctgtgggcgtacctgcaggcatacgccgacaaacaccgcgccgccggaaacggcttcggc
ttcggactggtcacgccggccagtgttacgcgcacactctcagcgcgctatcacaaggac
ggctcggagatacttctcgcgcaaggcgaaggcgagcgcccccgccgcttgacgccgcgt
gaatgcgcgcgtctgatgggttttccagacgacttcgtgatccccgtgagcgatacgcag
gcgtaccgtcagttcggcaacagcgtggtggttccggtcatgcacgaagtggcgcgcatc
atgacgcctcatgtcaaagcgctgcttgaggaagatcgcgaaccggcgtcaacagaagtg
ctcctgcgcgcgtag
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