Stutzerimonas kunmingensis: LW136_01025
Help
Entry
LW136_01025 CDS
T08242
Symbol
algB
Name
(GenBank) sigma-54-dependent response regulator transcription factor AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
pkg
Stutzerimonas kunmingensis
Pathway
pkg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LW136_01025 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pkg02022
]
LW136_01025 (algB)
Two-component system [BR:
pkg02022
]
NtrC family
KinB-AlgB (alginate production)
LW136_01025 (algB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
cREC_REC
Mg_chelatase
AAA_16
AAA_2
AAA_22
HTH_17
nSTAND3
VpsR
Xre-like-HTH
MCM
AAA_19
IstB_IS21
HTH_23
Tnp_22_trimer
HTH_29
HTH_28
HTH_psq
DUF815
Motif
Other DBs
NCBI-ProteinID:
UIP33084
LinkDB
All DBs
Position
complement(199275..200621)
Genome browser
AA seq
448 aa
AA seq
DB search
MDQTTDNGGRILLVDDEAAILRTFRYCLEDRGYTVMTAASAAQAEAILQRQVFDLCFLDL
RLGEDNGLDVLQQMRLLAPWMRVVIVTAHSAVDTAVDAMQAGAADYLLKPCSPEQLRLSA
AKQLEVRQMAARLEALEGEMKQRSDALGSHSPSMMAVLETARQVADTDANILILGESGTG
KGELARAIHTWSRRSKKAFVTINCPSLSADLMESELFGHNRGAFTGATESTLGRVNQADG
GTLFLDEIGDFPLALQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVREGKF
REDLLYRLNVITLNLPPMRERPEDVLTLAERFLASFVKNYGRPARGFSDAAVAALKTYRW
PGNVRELRNVVERASIICPQQMIEVSHLGLGEQVGSNAPRIGEPLSLEALEKAHIAGVLS
TSDTLDQAARILGIDASTLYRKRKQYGL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaacgacggacaacggcggacgcatcctcctggtggatgacgaagcggcgatc
ctgcgcaccttccgttactgcctggaggaccgcggctacacggtcatgacagcggccagt
gcggcacaggccgaggccattctgcagcgtcaggtgttcgacctgtgcttcctcgacctg
agactcggcgaagacaatggcctggacgtgttgcaacagatgcgcctgctcgcgccctgg
atgcgcgtggtcatcgtcaccgcccattcggctgtcgacaccgccgtggacgccatgcag
gccggcgccgcggactacctgctcaagccatgcagcccggaacagcttcgcctgtccgcc
gccaagcagctggaagtccgccagatggcggcccgactggaagcgctggaaggcgagatg
aagcagcgcagcgacgccctcggttcgcacagcccgtcgatgatggccgtgctggaaacc
gcgcggcaggtggcagacaccgacgccaacattctcatcctcggcgaatcgggtaccggc
aagggtgaactggcgcgcgccatccacacctggagccggcgctcgaagaaggccttcgtc
accatcaactgcccgtcgctgtccgccgacctgatggaaagcgaactgttcgggcataac
cgcggcgccttcaccggcgcgacggagagcacgctgggccgggtcaaccaggccgacggc
ggcacgctgttcctcgacgagatcggtgacttcccgctggcgctgcaacccaagctgctg
cgcttcatccaggacaaggagtacgagcgggtcggcgacccggtcacccgccgcgccgat
gtgcgcatcctcgcggcgaccaacctgaacctcgaagaaatggtgcgcgagggcaagttc
cgcgaggacctactgtatcgcctcaatgtcatcaccctcaacctgccgcccatgcgcgag
cgccccgaggacgtgctgaccctggccgaacgcttccttgcctcgttcgtgaagaactat
ggccgccctgcgcgcggtttcagcgatgcagcggttgccgcactgaagacctaccgctgg
ccgggcaacgtgcgtgaactgcgcaacgtggtggaacgggcgagcatcatttgcccgcag
cagatgatcgaggtcagccacctcgggctgggcgaacaggtaggcagcaacgcgccacgc
atcggtgagccgctcagcctggaggcgctggagaaagcgcatatcgccggcgtgttgagc
accagcgatactctcgatcaggccgcgcgcatcctgggtatcgacgcctcgaccctctac
cgaaaacgcaagcagtacggcctatga
DBGET
integrated database retrieval system
