Stutzerimonas kunmingensis: LW136_01140
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Entry
LW136_01140 CDS
T08242
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pkg
Stutzerimonas kunmingensis
Pathway
pkg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LW136_01140 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkg03400
]
LW136_01140 (recB)
Enzymes [BR:
pkg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LW136_01140 (recB)
DNA repair and recombination proteins [BR:
pkg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LW136_01140 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
ResIII
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UIP33106
LinkDB
All DBs
Position
229864..233412
Genome browser
AA seq
1182 aa
AA seq
DB search
MKLDLLDSPFNGRSLIEASAGTGKTWTLTALYARLLLERQLSVGQILVVTYTTAATAELR
ERIRARLADLLAVYEGTPSSDDFLNRLHARYPDEASRRRLLLAVHGFDEAAIFTIHGFCQ
RALQDAAFEAGGDFDSELTADDREIIDALLADAWRSELADADPAWARFLAKSRITPVWLR
QRLRSHLGKPYLRVEPQGAPVAADLRPVEAAWQRAADLWREAGTAWIAELRAHGGLSQST
HKGIKFEPWRSELDAYFADPAVMFDLPDGAAKFGVRALSKACKKGFDAPVCELAHALDEL
ADQVAEALPAGKQRLIALQVALLERLNRELPERKAAQRLLAFDDLLNRLDLALKGPVGED
LAASLRATYPLALIDEFQDTDPIQYAIFNRIYAKAGEASLCFVGDPKQAIYAFRGADLAT
YMTAKQQADRVPFNLPTNYRSTPELITALNQLFDHPQPFAQPDLRYPAVGAADKPRASLR
LVEEGEAAPLSLVWLGDDPLGKGEAAQLAASDTARRIALQLAGAAEGRAGFEEGGEFKPL
KGGDIAVLVANHRQAGMIADELAARGVPSVRRGRDSVWRSEEAAELAAVLAAYAEPGREG
LLRYALATRLLGRSAADLARCQDDQQQWDAEREAAERYHQLWQQQGFMRVFRAWLDEQAV
AERLLARVDGERRLTNLLHLGELLQAESLLRPGLEPLLAWFNLQRGSEGAGEEALLRLES
DAERVQIVTIHTSKGLEYPLVFCPFLWDGKLLGKNRDSARCHDANGQPLLDLGSDALEDN
LERARQEVFAEQLRLAYVALTRARDRLWLHWGPVNLCKPKKDGSLADEGLHSSALAWLLH
GRDLPGEHPLSELGNHLADLNGGSLRLAIERLVATSDGRMACLPLESREASTQGSGRAAP
PEQLAQLNRNLYSAWRIGSFSGLAAGMHMEAPDRDALAIPDAGEPGSGFFAFPRGARAGT
CLHAILEDWARGKGELESLVEPALQAYGLPLEWKEIAISHLQKVLETDMDGAGLTLAALQ
SARRLPELGFTFPVRDLDVTRLRSLLVDPANGLAEPLREAAVRLEFDSLKGFLKGFIDLT
FEHGGRWYIADYKSNWLGPDASYYGGERLLQALAGEHYYLQYLIYLVALRRFLRQRLADF
QDEQLGGAFYLFLRGMPEAGVYFARPDDALLDALDRLFEEGK
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgacctgctcgactcgcccttcaacggccgctcgctgatcgaggccagcgcc
ggcaccggcaagacctggacgctcaccgcgctctacgcccgcctgctgctggagcggcag
ctgtcggtggggcagattctggtggtcacctacaccaccgccgccactgctgaactgcgt
gagcgcattcgcgcacggctggccgacctgctggcggtctatgaaggcacgccgagcagc
gacgactttctcaaccgcctgcacgcccgctacccggacgaagcctcgcggcgccgtctg
ttgctggcggtgcacggcttcgacgaggcggcgatcttcaccattcacggcttttgccag
cgcgccttgcaggacgccgccttcgaggccgggggcgatttcgacagcgagctgaccgcc
gatgaccgcgagatcatcgatgcgctgctcgccgatgcctggcgtagcgagctggccgat
gccgatccggcctgggcgcgcttcctggccaagagccgcatcacaccggtgtggctgcgc
cagcggctgcgcagtcatctgggcaagccgtacttgcgggtggaaccgcagggtgcaccg
gtcgccgccgacctgcgcccggtcgaggccgcctggcaacgcgccgccgatctgtggagg
gaagcgggtaccgcctggatcgccgagctccgggcgcacggtgggctcagccaaagtact
cacaaaggcatcaagttcgagccctggcggagcgagctcgacgcctattttgccgacccg
gccgtgatgttcgatctacccgatggcgcggccaagttcggcgtgcgcgccttgagcaag
gcctgcaagaagggcttcgacgcgccggtgtgcgagttggcccatgcgctggacgagctg
gccgatcaggtggccgaggcattgccagcgggcaagcaacggctgatcgccctgcaggtc
gcgctgctggaacggctcaaccgcgagctgcccgagcgcaaggcggcgcagcggctgttg
gccttcgatgatctgctcaatcgcctggatctggcgctgaaaggtccggttggcgaagac
ctggcggcctcgctgcgcgccacctatccgctggcgctgatcgacgaattccaggacacc
gacccgatccagtacgccatcttcaaccgcatctatgccaaggccggcgaggcgtcgttg
tgtttcgtcggcgatcccaaacaggcgatttatgccttccgcggggcggaccttgcaacc
tatatgacggccaagcagcaggccgatcgcgtgcccttcaacctgccgaccaattaccgc
tcgacgcccgagctgatcaccgccttgaaccagctgttcgatcatccgcagccgttcgcc
caaccagatctgcgctatccagcggtaggcgcggccgacaagccgcgtgcgagcttgcgg
ctggtggaggagggcgaggcggcgccgctgtcgctggtctggctgggtgacgatccgctg
ggcaagggcgaggccgcgcaactggcggcgagcgacactgcccggcgtatcgccctgcaa
ctggcgggcgccgccgagggtcgtgccggtttcgaagagggtggtgagttcaaaccgctg
aagggtggcgatatcgccgtgctggtggccaaccaccgccaggccgggatgatcgccgat
gagctggcggcgcgcggtgtgcccagcgtgcgccgcgggcgtgacagcgtctggcgcagt
gaggaagcggctgagctggccgcggtgctggccgcctacgccgagcccggccgcgaaggg
ctgctgcgctatgcactggccacgcgcctactgggccgcagcgctgccgatctcgctcgt
tgccaggacgatcagcagcagtgggacgccgagcgcgaagccgccgagcgctatcaccag
ctctggcagcagcaggggttcatgcgcgtattccgggcctggctcgacgagcaggcggtg
gccgaacggctgctggcgcgtgtcgatggcgaacgtcggctgaccaacctcttgcatctg
ggtgaactgttgcaagccgaaagcctgctgcgcccgggtcttgagccgctgctcgcctgg
ttcaacctgcagcgcggcagcgaaggcgccggcgaagaagccctgctgcgcctggaaagc
gatgccgagcgggtgcagatcgtcaccatccacaccagcaagggcctggaatacccgctg
gtgttctgccccttcctctgggacggcaagctgctcggcaagaaccgcgatagcgcccgt
tgccacgatgctaatggccagccgctgctggatctcggcagcgacgcgctggaagacaac
ctcgaacgcgcccgccaggaggtcttcgccgagcagctgcgcctggcctatgtcgccctg
actcgcgcgcgcgaccggctctggttgcactgggggcctgtgaatctctgcaaaccaaaa
aaggatggcagcctagcggacgaaggtctgcacagcagcgccctggcctggctgctacac
ggccgggatctccctggcgagcaccccttgagcgagctgggcaatcatctggcggacctc
aatggcggaagcctgcgcctggccatcgagcgcctggtcgccacgagcgacgggcgcatg
gcctgcctgccgctcgagtcgcgtgaggccagcacacagggcagcggccgcgcagcgccg
cccgagcagctggcgcagctcaaccgcaacctctacagcgcctggcgcatcggcagcttc
tcaggcctcgccgccggcatgcacatggaagcgcccgaccgcgacgccctggccatcccc
gatgccggcgagccgggcagcggcttctttgctttcccccgcggtgcgcgggccggtacc
tgcctgcacgcgatcctcgaagattgggcgcgcggcaaaggcgagctggagtcgctggtc
gaacccgctttgcaggcctacggtctgccgctggagtggaaggagatcgccatcagccat
ctgcagaaggtgctggaaaccgatatggatggcgccggcctgaccctcgccgcgctgcaa
tcggccagacgcctgcccgaactcggcttcaccttcccggtacgggacctcgacgtgacg
cggctgcgcagcctgttggtcgatccggccaacggccttgccgaacccttgcgcgaagcg
gcggtgcggctggagttcgacagcctcaagggttttctcaagggctttatcgacctgacc
ttcgagcacggcggccgctggtacatcgccgattacaaatccaactggctcggcccggac
gccagttactacggcggcgaacggctgctgcaggcgctggcaggcgagcattactacttg
caatacctgatctatctggtggcgctgcgccgcttcctgcgtcagcggctggcggatttt
caagacgagcagctcggcggcgccttctacctgttcctgcgcggcatgcccgaagccggc
gtctatttcgcgcgaccggatgatgcgctgctcgacgcactggatcgtttgttcgaggag
ggcaagtga
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