Stutzerimonas kunmingensis: LW136_01145
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Entry
LW136_01145 CDS
T08242
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pkg
Stutzerimonas kunmingensis
Pathway
pkg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LW136_01145 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkg03400
]
LW136_01145 (recD)
Enzymes [BR:
pkg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LW136_01145 (recD)
DNA repair and recombination proteins [BR:
pkg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LW136_01145 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
Helicase_RecD
AAA_22
SLFN-g3_helicase
UvrD_C
AAA_16
nSTAND3
CbiA
AAA_28
DEAD
Flavi_DEAD
DUF87
ATPase
T2SSE
Motif
Other DBs
NCBI-ProteinID:
UIP33107
LinkDB
All DBs
Position
233705..235555
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AA seq
616 aa
AA seq
DB search
MTLRSELPLGPLERAFVASLQRLEPDTPEPVLLAAALCCEALSSGDVCLPLQRFASKRPW
PEVDVSLPSLAQWRAQLEASPLIGGPDDYAPLTLVGDRLYLARYQAYEQQLAQQLLTRAV
DAPDVDKARLGDSLARLFAFNQQSPDWQRLAAAQAVRRRLAVISGGPGTGKTTTVVRLLA
ALLEQPGGERLAIGLAAPTGKAAARMAEAIRNAKADLPVSDAVKEALPDEARTLHRLLGS
RGDSPKVRHDAANPLALDVLVVDEASMVDLALMAKLVAALPPKARLILLGDKDQLAAVEA
GAVFAELCEGRGFDSQAATDLQRITGQNVPVETPRSRLGDAVVLLTHSHRFAGDSGIGEL
ARRINGGDAKGTVALLQEGRADLAWNATPTSAALIERLEQGYSTYLQAARQTDPSAAFEA
FNGFRALTAQREGAFGVTGINEALEARFKRRLGVPARERWYPGRAVMVRQNDYALGLFNG
DIGLCLKTEQGLRVFFEGDEGYRGFAPARLPSHDSAFAMTVHKSQGSEFTEVLLALPEQP
SPLLTRSLFYTGITRAKRKVEIWALPARLAEAVNTRAERAAGLAERLALPSAQTRATEEV
RAAKPDEPKSDQLSLF
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttcgttcagagttacccctcggccccctggagcgcgccttcgtcgccagcctg
caacgccttgagcccgatactcctgagccggtgctgctcgccgctgcgctgtgttgcgaa
gccctttcctcgggcgatgtctgcctgccgctccaacgattcgccagcaaacggccctgg
cctgaggtcgacgtcagcctgccgtcgctggcgcaatggcgtgcgcaacttgaggcctcg
cccctgatcggcggaccggacgattacgcgccgctgacccttgtcggtgaccgcctctac
cttgcccgttaccaagcctatgaacagcagctggcgcaacagctgctgactcgggcggtg
gacgcacccgatgtcgacaaagccaggctgggcgacagcctggcgcgcttgttcgccttc
aaccaacagagccccgactggcagcggttagccgcggcccaggcggtgcgtcggcgcctg
gcggtgatctccggcggccccggcaccggcaagaccaccacggttgtgcgcctgctggcc
gcactgttggagcagcccggtggcgaacgcctggccatcggcctcgcggcacctaccggc
aaggcggcggcgcgcatggccgaggcaatccgcaacgccaaggccgatctgccggttagc
gatgcggttaaagaagcgctgccggacgaggcgcgcaccctgcatcgcctgctcggcagc
cgcggtgacagcccgaaggtgcgccatgacgcggccaacccgctggcgctggacgtgctg
gtggtggacgaagcgtcgatggtcgatctagcgctgatggccaagctggtcgccgcgctg
ccgcccaaggcgaggctgattctgctcggcgacaaggaccagctggccgccgtggaggcc
ggcgcggtgttcgccgaactctgtgaagggcgcggtttcgatagtcaggccgcgaccgat
ctgcaacgcattaccgggcagaacgtaccggttgagacgccgcgctcgcgcctcggcgat
gcggttgtgctgctcacccacagccaccgcttcgccggcgacagcggtatcggcgagctg
gcgcggcgaatcaatggcggcgatgccaagggcacggtggcgctgctgcaggaagggcgc
gccgatcttgcctggaatgccacgccaacgtccgccgcattgatcgagcgactggagcag
ggctattcgacctatctgcaggccgcacgccagaccgatccatccgccgcgttcgaggcc
ttcaacggtttccgcgcgctgactgcccagcgcgaaggcgcctttggcgtcactggcatc
aacgaggcgctggaagcgcgcttcaagcgtcgcctcggcgtgcccgcccgcgaacgctgg
taccctggccgcgcggtgatggtccggcagaacgactacgccctgggcctgttcaacggc
gatatcggcttgtgtctgaaaaccgagcagggcctgcgggtgttcttcgagggcgacgag
ggctatcgcggctttgccccggcacggttgccgagtcatgacagcgccttcgccatgacc
gtgcacaaaagccagggctcagagttcaccgaggtgctgctggcgttgccggaacagccc
agcccgctgctgacgcgctcgctgttctacacgggcatcacccgcgccaagcgcaaggtg
gagatctgggcgctgccggcgcggctggccgaagcggtcaatacacgcgccgagcgcgcc
gcaggattggccgaacggttggccctccccagcgctcagaccagagccacagaggaagtg
cgggcggccaagccagatgagccaaaaagcgatcagctcagccttttctaa
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