Stutzerimonas kunmingensis: LW136_02535
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Entry
LW136_02535 CDS
T08242
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pkg
Stutzerimonas kunmingensis
Pathway
pkg03030
DNA replication
pkg03430
Mismatch repair
pkg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LW136_02535 (holA)
03430 Mismatch repair
LW136_02535 (holA)
03440 Homologous recombination
LW136_02535 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkg03032
]
LW136_02535 (holA)
03400 DNA repair and recombination proteins [BR:
pkg03400
]
LW136_02535 (holA)
Enzymes [BR:
pkg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LW136_02535 (holA)
DNA replication proteins [BR:
pkg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LW136_02535 (holA)
DNA repair and recombination proteins [BR:
pkg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LW136_02535 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
nSTAND1
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UIP33362
LinkDB
All DBs
Position
complement(551143..552171)
Genome browser
AA seq
342 aa
AA seq
DB search
MKLSPAQLGKHLQGPLAPVYVVCGDEHLLCQEACDAIRTATRARGFSERQVFHVETGFDW
SQLIEAGASLSLFAEKRLLELRIPNGKPGDKGAAALLEYLARPAEDTVLLVSLPKLDGST
QKTKWAKALIDGKDVQFLQIWPVDAAQLPQWIRQRLAQAGLSADQEAVELISARVEGNLL
AAAQEIEKLKLLAEAGQVTAETVQAAVADSARYDVFGLIDAALHGQAAHALHMLEGLRGE
GVEAPVILWALARELRLLANIAQQYAQGTPLERAFSQARPPVWDKRRPLVSKALQRHNAA
GWNQLLRDAQHIDEQIKGQAAGDPWIGLADICLQLSGRRIGT
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttctcccgctcagctcggcaaacacctgcaaggcccgctggcgcccgtgtac
gtcgtctgtggcgacgagcacctgctgtgccaggaagcctgcgatgcgatccgcacagcg
acccgagcgcggggcttcagtgagcgtcaggtctttcacgtggagaccggcttcgactgg
agccagttgatcgaagccggtgcgagtctttcgctgttcgccgagaagcgcctgctcgaa
ctgcgcatccccaacggcaagcccggtgacaagggtgccgcggcgctgctggaatatctg
gcccgccccgccgaggacaccgtgctgctggtcagtctgcccaagctcgacggcagcacc
cagaagaccaagtgggccaaggcgctgatcgatggcaaggacgtgcagttcctgcagatc
tggccagtggatgccgcgcagctgccgcagtggatacgtcagcggctggcccaggcgggc
ctgtccgcggaccaggaagccgtcgaactgatcagcgcccgggtcgaaggcaacctgttg
gccgcggcgcaggaaatcgaaaagctcaagctgctggccgaagccggacaggtcaccgcg
gaaaccgtccaggccgcggtggctgatagcgcccgttacgatgtattcggcctgatcgac
gcagccctgcacggccaggcggcccatgcgctgcacatgctggagggcctgcgcggtgaa
ggcgtcgaggcaccggtgatcctctgggcgctggcccgcgaactgcgcctgctggccaat
attgcgcagcaatatgcccagggcactccgcttgagcgtgccttcagccaggcccgcccg
ccggtctgggataagcgtcgcccgctggtttccaaagcactgcaaaggcataacgcggcc
ggctggaaccagttgctgagagacgcgcaacacatcgacgagcagatcaagggccaggcc
gccggggatccctggatcggtctggcggacatttgcctgcaactgagtggccgccggatc
ggtacctga
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