Stutzerimonas kunmingensis: LW136_03080
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Entry
LW136_03080 CDS
T08242
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pkg
Stutzerimonas kunmingensis
Pathway
pkg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LW136_03080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pkg02022
]
LW136_03080
02035 Bacterial motility proteins [BR:
pkg02035
]
LW136_03080
Two-component system [BR:
pkg02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
LW136_03080
Bacterial motility proteins [BR:
pkg02035
]
Pilus system
Twitching motility proteins
LW136_03080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_50
Pre_tape_measure
AAA_5
AAA_19
AAA_16
VpsR
HTH_30
Mg_chelatase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UIP33465
LinkDB
All DBs
Position
complement(673282..674619)
Genome browser
AA seq
445 aa
AA seq
DB search
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARECLAREHYDLCLTDMRLPD
GSGLELVQYIQQQHPQLPVAMITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVGTAL
RLRAPTAEMPVDSRLLGSSPPMKTLRKQIGKLARSQAPVYISGESGSGKELVARLIHEQG
PRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIE
LRVPPLRERREDIGLLAEAMLRRLAAECGDSSAHLHPDALAKLENYRFPGNVRELENMLE
RAYTLCEGDEIKAGDLRLADSPGVSENGEASLAQIDNLEDHLEEIERKLIMQALEETRWN
RTAAAQRLGLTFRSMRYRLKKLGLD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcgccagaaagcactgatcatcgatgacgagccggatatccgcgaactgctg
gaaatcactcttggccgcatgaaactcgatacccgcagcgctcgcaacctcaaggaagcg
cgcgagtgcctggcccgcgagcattacgatctgtgccttaccgatatgcgcctgcccgat
ggcagcggcctggagctggtgcaatacattcagcaacagcacccgcagctgccggtggcg
atgatcactgcatacggcagcctggataccgccattggcgcgctcaaggccggggcattc
gactttctcaccaaaccggtggacctcaaccgcttgcgcgagctggtcggcacggccctg
cgcctgagggcgcctacagcggaaatgccggtggacagccgcctgctcggcagctcgcca
cccatgaagacccttcgcaagcagatcggcaaactcgcccgcagccaggcgccggtttat
atcagcggcgagtccggcagcggcaaggagctggtggcccgactgattcacgagcagggt
cctcgtagtgaaaagccctttgtgcccgtcaactgcggcgcgatcccgtcggaactgatg
gaaagcgagttcttcggccacaagaaaggcagcttcagtggcgccatcgaggacaagccc
gggctattccaggccgccaatggcggcacgctgttcctcgacgaggtagccgacctgccg
ctgccgatgcaggtcaagctgctgcgcgcgatccaggaaaaagctgtacgcgcggtcggc
ggcgctcaggaagtaatggtcgatgtgcgcatcctttgcgccacccacaaggacctcgcc
agcgaagtggccgcaggccgtttccgccaggatctgtattaccgcttgaatgtcatcgaa
ctgcgcgtgccgccactgcgcgagcgtcgcgaagacattggcctgctcgccgaagccatg
cttcggcgtcttgcggcggagtgcggtgacagcagcgctcacctgcacccggatgctctg
gccaagctggaaaactatcgcttcccggggaacgttcgtgagctggagaacatgctcgag
cgggcctacacactctgcgagggcgatgagatcaaggcgggcgatctacgcttggcagac
agcccaggcgtatcggagaacggtgaagccagtctggcgcagatcgacaatctggaagat
cacctggaagagatcgagcgcaagctgatcatgcaggcgctggaggaaacccgctggaac
cgcaccgcggcagcccaacggctggggctgaccttccgttcgatgcgttaccggttgaaa
aaactcggactggactga
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