Stutzerimonas kunmingensis: LW136_06140
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Entry
LW136_06140 CDS
T08242
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pkg
Stutzerimonas kunmingensis
Pathway
pkg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LW136_06140 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkg03400
]
LW136_06140 (xseA)
Enzymes [BR:
pkg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LW136_06140 (xseA)
DNA repair and recombination proteins [BR:
pkg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LW136_06140 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
SKA2
Motif
Other DBs
NCBI-ProteinID:
UIP34016
LinkDB
All DBs
Position
complement(1328653..1330029)
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AA seq
458 aa
AA seq
DB search
MLKDPFQRLNLDREVLTVSQLNGRARLLLEDVFAQVWVEGEISNLARPASGHIYFTLKDK
NAQVRCALFRQNAARVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTLEPAGDGALRLAF
EALKEKLSAEGLFAAERKAALPAHPRRIGIVSSPTGAVIRDIISVFKRRAPQVELTLIPT
AVQGREATAQIVHALQLADAQGFDALILARGGGSLEDLWCFNEEAVARAVDACVTPIVSA
VGHETDVSIADFVADVRAPTPSAAAELLAPSSADLQHRLSGLQQRLVLRMRDRLHRDAMR
LEGLTRRLRHPGERLQQQAQRIDDLEQRLLRAVDRRLCSGRERLARLETRLAAQHPGRSL
NLLLQRLEHLSSRLPRAMQANLKGRRQQLQGLAQTLNVVSPLATLSRGYSILLDERGQAI
RSASQTQPGQRLKARLGEGELEVRVEDNHLAPVTLPLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaagatcccttccagcgtctcaatctcgatcgcgaagtgctgaccgtcagtcag
ctcaacggtcgcgcccgcctgttgctcgaggacgtgttcgcccaggtctgggtcgaaggc
gagatttcaaacctcgcccgcccggcttccggccacatctatttcaccctcaaggacaag
aacgcccaggtgcgctgtgcgctgttccggcagaacgcggcgcgggttcgccaggccctg
cgcgacggcctggcggtgcgggtacgcggcaaggtctcgctgttcgagggacgcggcgac
taccagctgattctcgatacgctggagccggccggtgacggcgctttgcgcctggccttc
gaggcactcaaggaaaagctcagcgccgaaggtctgttcgcggccgaacgcaaggccgcc
ctgcccgcccacccgcgacgcattggcatcgtcagctcgccgaccggcgcggtgatccgc
gacatcatctcggtgttcaaacgccgcgcgccgcaagtcgagctgacgctgatccccacc
gccgtgcaaggtcgcgaagccaccgcgcagattgtccacgcactgcaactggccgatgcc
cagggcttcgatgcgctgattctggctcgcggcggcggctcgctggaggacctctggtgc
ttcaacgaagaagcggtggcgcgcgcggtggatgcctgtgtcacgccgattgtcagcgcc
gtgggccacgaaaccgatgtctcgatcgccgacttcgtcgccgacgtccgcgcgccaacg
ccatccgcggctgccgagctgctggcacccagcagcgccgacctgcaacaccggctgagc
gggctgcaacagcgtctggtgctgcgcatgcgtgatcgtctgcaccgtgacgccatgcga
ctggaaggcctgacccgccgcctgcgccaccccggcgaacggctgcagcagcaggcccag
cgcatcgacgacctcgagcagcgcctgctgcgcgccgtcgaccgccgcctgtgcagcggc
cgggagcgtctggcccgcctggaaacacgcctggccgcgcaacacccggggcgttcgctg
aatctgttgctgcagcgactcgaacacctctcctcgcgtctgccgcgagcgatgcaggcc
aacctgaaaggccgccggcaacagctacagggcctcgcccagacacttaatgtggtcagc
ccgctggccacactcagccgcggctacagcattctgctcgacgagcgcggccaggcgatc
cgcagcgccagccagacgcaacctggccagcgcctcaaggccaggctcggcgagggcgaa
ttggaggtgcgggtggaagacaatcatctggcaccggtcacgctgccgctgctctga
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