Stutzerimonas kunmingensis: LW136_06425
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Entry
LW136_06425 CDS
T08242
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pkg
Stutzerimonas kunmingensis
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkg03021
]
LW136_06425 (rapA)
Transcription machinery [BR:
pkg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LW136_06425 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
ssDNA-exonuc_C
Motif
Other DBs
NCBI-ProteinID:
UIP34067
LinkDB
All DBs
Position
complement(1383441..1386290)
Genome browser
AA seq
949 aa
AA seq
DB search
MAQQYLPGQRWISDSEAELGLGTILTQDGRMLTVLYPATGETRQYATRSAPLTRVRFVPG
DEITHFEGWKMTVREVDDVDGLLVYHGLTAQNEARTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLQHQSAQLQSSLWGLGGVRAQPIAHQLHIAKEVADRIAPRVLLADEVG
LGKTIEAGLIIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLEVALFDAERFIESDA
SNPFEDTQLALVSLEWLKEDERAQDAAFAAGWDVLVVDEAHHLVWHPEGASAEYKLVEQL
TEVIPGVLLLTATPEQLGLDSHFARLRLLDPNRFHDLDAFRAESSSYQPVAEAVQELLDE
GRLSQQAHQTIHDFLGAEGEALLAAATDGDIEASSRLIRELLDRHGTGRLLFRNTRAAVQ
GFPERQLHPYPLPCPAEYLELPLGEHAELYPEVAFQSQQDDGEASNRWWQFDPRVEWLID
TLKMLKKYKVLVICAHAETALDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFG
AQVLICSEIGSEGRNFQFSHHLVLFDLPAHPDLLEQRIGRLDRIGQQHTIQLHVPYLETS
PQERLFKWYHQALNAFLNTCPTGNALQHRFGQRLLGQLEEGDDDAYQLLIDEARAERERL
EAELHSGRDRLLELNSGGGEQGKALVEAIEEQDDQFALPIYMEQLFDAFGIDSEDHSENA
LVLRPSEKMLDASFPLGDDEAVTITYDREQALAREDMQFLTWEHPMVQGGMDLVLSGSMG
NTAVALIKNKALKPGTVLLELLFVSEVVAPRALQLSRFLPPLALRCLLDGNGNDLASKVA
FDTLNDQLESVPRASANKFVQAQRDVLATQIAAAEAKIAPRHSERVAEAQRKLKAGLDEE
LARLVALQAVNPSVRDSEIEALRQQREDGLAALEKAALRLEAIRVLVAG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatctaccggggcaacgctggatcagcgacagcgaggcagaactcggc
ctcggaaccatcctgacccaggatggacggatgctcaccgtgctctatccggcgaccgga
gaaacgcgccagtacgcgacacgcagcgccccactgacgcgggtgcgcttcgtgcccggt
gacgagatcacccatttcgaaggctggaagatgaccgtgcgcgaggtcgacgacgtcgac
ggcctgctggtctaccacggcctgaccgcacagaacgaagcccgcaccctgccggaaacc
cagctgtcgaacttcattcagttccgtctggccagcgaccgcctcttcgccgggcagatc
gacccgctcgcctggttcagcctgcgctaccacaccctgcagcaccagagcgcccagctg
cagtcctcgctgtggggcctcggtggcgtgcgtgcgcaacccatcgcgcaccagctgcac
atcgccaaggaagtcgctgaccgcatcgccccgcgcgtactgctggccgacgaagtgggc
ctgggcaagaccatcgaagccgggctgatcatccatcgccagttgctctcaggccgcgcc
agccgggtgctgatcctggttccggaaaacctccagcaccagtggctggtggagatgcgc
cgccgcttcaacctggaagtcgcactgttcgatgccgagcgtttcatcgagagcgatgcc
agcaacccgttcgaagacacccagctggcactggtatcgctggaatggcttaaggaagac
gaacgcgcccaggatgctgcctttgccgccggctgggacgtgctggtggtggacgaagcg
caccatctggtctggcacccggaaggtgccagcgccgaatacaagctggtcgaacagctg
accgaagtgatccccggcgtgctgctgctgactgcaactccggaacagctcggtctggac
agccacttcgcccgtctgcgtctgctcgatccgaatcgtttccatgacctcgatgccttc
cgcgccgaaagctccagctaccagccggtggccgaagccgtgcaggagctgctcgacgag
ggccgtctctcacagcaggcacaccagactatccacgatttcctcggcgccgagggcgaa
gccctgctggccgccgccaccgatggcgacatcgaggccagcagccggctgatccgcgag
ctgctcgaccgtcacggcaccggccgtctgctgttccgcaacacccgtgccgccgtgcag
ggtttcccggagcgccagctgcatccctatccgctgccctgcccggccgaatacctcgaa
ctgccgctaggggagcatgccgagctgtatccggaggtcgccttccagagccagcaggac
gacggcgaggcgagcaaccgctggtggcagttcgatccgcgtgtcgagtggctgatcgac
acgctgaagatgctgaagaagtacaaggtgctggtcatctgcgcccatgccgagaccgcc
ctggatctggaagacgcgctgcgcgtgcgctccggcattccggcgactgtgttccacgag
ggcatgagcatcctcgagcgcgaccgcgccgcggcctacttcgccgacgaggagtttggc
gcgcaggtgctgatctgctcggaaatcggcagtgagggccgtaacttccagttcagccac
catctggtgctgttcgatctgccggcgcacccggaccttctcgagcagcgcatcggccgt
ctcgaccgcatcggccagcagcacaccatccagctgcatgtgccgtacctggaaaccagc
ccgcaggaacgcctgttcaagtggtatcaccaggcactgaacgccttcctcaacacctgc
ccgaccggcaacgccctgcagcaccgcttcggacagcgtctgctggggcagctggaagaa
ggtgacgacgacgcctatcagctgctgatcgacgaggcccgcgccgagcgcgagcgcctg
gaagcggagcttcacagcggccgcgaccgcctgctggagctcaattccggcggcggcgaa
caaggcaaggcactggtcgaagccatcgaggagcaggacgaccagttcgccctgccgatc
tatatggagcagctgttcgatgcgttcggcatcgacagcgaagaccactcggaaaacgcc
ctggtattgcgccccagcgaaaagatgctggatgccagcttcccgctgggcgacgacgag
gccgtgaccatcacctacgaccgcgaacaggccctggcccgcgaagacatgcagttcctc
acctgggaacaccccatggtgcagggtggcatggacctggtgctgtccggatccatgggc
aataccgcggtcgcgctgatcaagaacaaggcgctcaagccgggtaccgtgctgctcgag
ttgctgttcgtcagtgaagtggtggcgccgcgcgcgctgcaactgagccgcttcctgccg
ccgttggcgctgcgctgcctgctcgacggcaacggcaatgacctggcctcgaaggtggcc
ttcgatacgctcaacgatcagctggaaagcgtgccgcgagccagcgccaacaagtttgtc
caggctcagcgcgatgtgctggcaacccagatcgccgccgccgaggccaagattgcaccg
cgtcacagcgagcgcgttgccgaagcacaacgcaagctcaaggccggcctggacgaggaa
ctggcgcgcctggtagccctgcaggcggtcaacccgagcgtgcgcgacagcgagatcgaa
gccctgcgtcagcagcgcgaagacggcctggcagcactggaaaaggcggccttgcgattg
gaggcaatacgggtgctggtcgccggctga
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