Stutzerimonas kunmingensis: LW136_06540
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Entry
LW136_06540 CDS
T08242
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pkg
Stutzerimonas kunmingensis
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkg03016
]
LW136_06540
Enzymes [BR:
pkg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LW136_06540
Transfer RNA biogenesis [BR:
pkg03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LW136_06540
Prokaryotic type
LW136_06540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
UIP34090
LinkDB
All DBs
Position
complement(1417268..1418251)
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AA seq
327 aa
AA seq
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MDLLFLGTSSGTPTRARNVTALALLEDTGKSWYLIDCGEGTQHRLLRTPLSLHDLRAICI
THVHGDHCYGLPGLLASAGMMGRKAALTIISPQGIETWVRATLEMSQSWLGYDLDFHAVE
SLGEWRNLNMRIEATALSHRVPCYGYSFTEARPDPRLDIDRLERDGVPRGPLWGQLARGF
DVEHEGRKLRSDDYLSFSRAPQRIVIGGDNDRPDLLADACRGAQLLVHEATYTEAVANDA
RNDFGHSTAASVARFAQTVGLPNLVLTHFSARYQKNAGRGHSIDDLCAEASALYAGKLLL
AEDFMRLHLGKDGQLTPVEPPRPRPPR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtggatctgttatttctcggcacttcatccggcacccccacccgcgcgcgcaatgtcacc
gctctggccttgctggaggacaccggcaagagctggtacctgattgactgcggcgaaggc
acccagcaccggctgttgcgcacgccgctgtctctgcacgacctgcgcgccatctgcatc
acccatgtacatggcgaccactgctacggcctgcccggtctgctcgccagcgccgggatg
atggggcgcaaggccgcgctgacaatcatctcgccgcagggcatcgaaacctgggtgcgc
gccacgctggagatgagccagagctggctgggctacgacctcgactttcacgcggtcgaa
tcgctgggcgagtggcgcaacctgaacatgcgcatcgaggccaccgccctgtcccaccgt
gtgccctgctacggctacagcttcaccgaggcccggcctgatccgcggctggacatcgac
cgcctcgagcgcgacggcgtgccccgcggcccgctctggggccagctggcacgcggcttc
gatgtcgagcacgaaggccggaaactgcgcagcgacgactacctgagcttcagccgtgcg
ccgcaacgcatcgtcatcggcggcgacaatgatcgtcccgatctgcttgccgacgcctgc
cgcggcgcccagttgctggtgcacgaggcgacctacaccgaagcggtggccaacgacgcg
cgcaatgactttggccacagcacggcggcatcggtggcgcgctttgcgcaaacggtcggc
ctgccgaatcttgtgctgacccacttcagcgcgcgctatcagaagaacgccgggcgtggt
cactcgatcgacgacctgtgcgccgaagccagcgccctttacgccggtaagctgctgctt
gccgaagacttcatgcgcctgcacctcggcaaggacggccagctgacgcccgtcgagcca
cctcgcccacgcccgccacgctga
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