Stutzerimonas kunmingensis: LW136_08675
Help
Entry
LW136_08675 CDS
T08242
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pkg
Stutzerimonas kunmingensis
Pathway
pkg03030
DNA replication
pkg03430
Mismatch repair
pkg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LW136_08675 (dnaE)
03430 Mismatch repair
LW136_08675 (dnaE)
03440 Homologous recombination
LW136_08675 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkg03032
]
LW136_08675 (dnaE)
03400 DNA repair and recombination proteins [BR:
pkg03400
]
LW136_08675 (dnaE)
Enzymes [BR:
pkg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LW136_08675 (dnaE)
DNA replication proteins [BR:
pkg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LW136_08675 (dnaE)
DNA repair and recombination proteins [BR:
pkg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LW136_08675 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
UIP34489
LinkDB
All DBs
Position
1818671..1822192
Genome browser
AA seq
1173 aa
AA seq
DB search
MPVSFVHLRLHTEYSLVDGLVRVKPLIKAVAAGGMPAVAVTDMSNMCSLVKFYKAAQGAG
IKPICGADIWMAGCDEDGPLSRLTLLAMNPKGYRNLTELISRGWTEGQRNDLVIIERDWV
KQASEGVIALSGAREGEVGQALLNGDEPLAESRLAEWRDVFADRFYLEVQRTSRVNDEEY
LHAAVALAERSGTPLVATNDVRFLKQEDFEAHETRVCIGEGRTLDDPRRPRTYSDQQYLK
TPAEMAELFSDLPEALENTVEIAKRCNIEVQLGTYFLPNFPVPEGMTIDDYLRQVSFEGL
EERLEVLLPKDTPDYEAKKQVYIDRLEFELGTIIQMGFPGYFLIVMDFIKWAKNNGVPVG
PGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMDGRDRVIDYVA
EAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAHEMEE
PLRDFLAVDEDAREIWEMALKLEGITRGTGKHAGGVVIAPTKLTDFAPIACDEEGGGLVT
QFDKDDVEQAGLVKFDFLGLRTLTIIKWALETINREQAKKGLEPINIDFIPLDDKPTYQL
LQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGRA
EVSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPEE
MAKQRGGFIEGCSNNGIDKELSGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHYP
SPFMAAVLSADMHNTDKVVILIEECRSMKLRIDPPDVNVSEFKFTVNDDGRIVYGLGAVK
GVGEGPVEAIAECRAEGGPFKDLFDFCARIDLKRINKRTLEALIRSGALDRLGPYFFEEV
KAYQANIDRNRAVLLAAMEEAVQAAEQTARSAESGHMDLFGGLFAEPEADVYANHRKARE
LSLKERLKGEKDTLGLYLTGHPIDEYEGEVRRFARQRIVDLRPARGEQTIAGLIVNLRVM
KNKKGDKMGFITLDDRSGRIEASLFAEAFNTAQALLQTDALVVVEGEVSNDDFSGGLRLR
AKQVMSLEEARTGLAESLRVKVAGEALKGERMRWLAEVCGRHRGACPITLEYTGRDARAL
LQFGEAWRIDPADNLIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtttccttcgtccatctacgtctgcataccgagtactcgctggtcgatgggctg
gttcgggtcaagccgctgatcaaggcggtcgcggcaggcggcatgccggcagtggcggtg
accgacatgagcaatatgtgctcgctggttaagttctataaagccgcgcagggcgccggc
ataaagccgatctgcggtgccgatatctggatggctggttgtgacgaggacggtcctctc
agccgcttgaccttgctggcgatgaatcccaaggggtatcgcaatctcaccgagctgatc
tctcgcggctggaccgaaggccagcgcaacgatctggtgatcatcgagcgcgactgggtc
aagcaggcctccgaaggtgtgatcgccttgtctggcgccagggagggagaggtcggccag
gcgctgctcaatggcgacgaaccactggccgaatcgcgtctggctgaatggcgcgatgtg
tttgccgatcgcttctacctggaagttcagcgcaccagccgagtcaatgacgaagagtat
ctgcacgctgcagtcgcgctcgccgagcgcagcggtacgccgctggtcgcgacgaacgac
gtgcgtttcctcaagcaggaagacttcgaggcccacgagacccgcgtatgcatcggtgaa
ggccgaactctggacgatccgcggcggccgcgtacctactctgatcagcagtatctgaag
actccggcagagatggccgagctgttcagcgacctccccgaggcgctggaaaacaccgtc
gagatcgccaagcgctgcaacatcgaagtgcagttgggcacctacttcctgccgaacttc
cccgtgcccgagggcatgaccatcgacgactacctgcgtcaggtgtcgtttgaaggactg
gaagaacgtctcgaggtgctgctacccaaggacactcctgactacgaggcgaagaagcag
gtctacatcgatcgccttgagttcgagctgggcaccatcatccagatgggcttccccggt
tacttcctgatcgttatggacttcatcaagtgggcgaagaacaacggtgtaccggtcggc
cctggtcgtggctcgggtgccggctcactggtcgcctacgtgctgaagatcaccgacctc
gatccgctggcctatgacctgctgttcgagcgcttcctcaaccccgaacgtatttccatg
cccgacttcgacgtcgacttttgcatggatggtcgcgaccgggtcatcgattacgtggcc
gaggcatatggccgtaatgcggtcagccagatcatcaccttcggcaccatggcggccaag
gccgtggtgcgcgacgtggcgcgggtgcagggcaagtcctacggcctggctgatcggttg
tcgaagatgattcccttcgaagtcggcatgacgctggaaaaggcccacgaaatggaggag
ccgctgcgcgacttcctcgccgttgacgaggacgcccgggaaatctgggagatggcgctc
aagctcgaaggcattactcgcggtaccggtaagcacgccggtggtgtggtgatcgcgcca
accaagctcaccgacttcgcgccgatcgcttgcgacgaggagggtggcggcctggtgacc
cagttcgacaaggacgacgtcgagcaggccggtctggtgaagttcgacttcctcggcctg
cggacgctgaccatcatcaagtgggcgttggaaaccatcaaccgcgaacaggccaagaag
ggcctggagccgatcaacatcgacttcatcccgctggatgacaagccaacctaccagttg
ctgcagaaggccgagaccaccgcggtattccagctcgaatcccgcggtatgaaggagctg
atcaaaaagctcaagcccgactgcctggaagacctgatcgcactggtggcgctgttccgt
cccggtccgttgcaatcgggcatggtggacgacttcatcaaccgcaagcacgggcgtgcc
gaagtctcctatccacacccggactaccagtacgctgggctggagccagtgctcaagccc
acctacggcatcatcctgtaccaggaacaggtgatgcagatcgcgcaggtcatggccggc
tatacgctgggtggtgcggacatgctgcgccgcgccatgggcaagaagaagcccgaggag
atggccaagcagcgcggtggtttcatcgaaggctgttccaacaatggcatcgacaaagaa
ctctcaggcaacatcttcgacctggtagagaagttcgccggttacggtttcaacaagtcg
cactcggcggcctacggtctggtttcctaccagacggcctggctcaaggcgcactacccg
tcgccgttcatggctgccgtgctctcggcggatatgcacaataccgacaaggtggtgatc
ctcatcgaggaatgccgcagcatgaagctgcgcatcgatccgccggatgtgaatgtttcc
gaattcaagttcaccgtgaacgatgacggtcgtatcgtctacggccttggtgcggtcaag
ggcgtcggtgaggggcccgtagaggccatcgccgaatgccgagcagaaggcgggccgttc
aaggatctgttcgatttctgcgcgcgtatcgacctgaaacggatcaacaagcgtaccctt
gaggcgctgattcgctccggtgcgctggatcgtctaggtccgtatttcttcgaagaggtc
aaggcctatcaggccaacatcgaccgcaatcgggcggttttgctggcggcgatggaagaa
gcggtgcaggccgcggagcagacggcgcgcagcgctgagagcggccacatggacctgttt
ggcggcttgttcgccgagcccgaagctgacgtttacgccaaccaccgcaaggcgcgtgag
ctgtctctgaaggagcgtctgaaaggtgaaaaggacaccctcggcctctatctcactggt
cacccgatcgatgaatacgagggcgaggtgcggcgcttcgcacgccagcgcatcgtcgat
ctacgtccggcgcgtggcgagcagaccattgccggcctgatcgtcaatctgcgggtaatg
aagaacaagaagggcgacaagatgggtttcatcaccctggatgaccgctcggggcgcatc
gaggcgtcactgttcgccgaggctttcaatactgctcaggcgttgttgcaaaccgatgcg
ctggtcgtggtggagggcgaggtaagcaacgatgatttttccggtggcctgcggctgcgc
gccaagcaggttatgagcctggaagaggcgcgcaccgggcttgccgaaagtctacgggtc
aaggtcgctggtgaggcgctcaagggtgagcgcatgcgttggctggccgaggtttgtggc
cgtcatcgcggggcctgcccgattacgctggaatacaccggtcgtgacgcgcgtgccctg
ctgcagttcggtgaagcctggcggatcgacccggccgacaacttgattcaggcattgcgt
gaccagttcgggcgcgacaacgtcttcctgcaataccgatag
DBGET
integrated database retrieval system
