Stutzerimonas kunmingensis: LW136_09960
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Entry
LW136_09960 CDS
T08242
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pkg
Stutzerimonas kunmingensis
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkg03009
]
LW136_09960 (rimO)
Enzymes [BR:
pkg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LW136_09960 (rimO)
Ribosome biogenesis [BR:
pkg03009
]
Prokaryotic type
ribosomal protein modification factors
LW136_09960 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAM_2
Radical_SAM
UPF0004
TRAM
RNase_II_C_S1
YajR_YAM
CLP1_P
DUF5005
Motif
Other DBs
NCBI-ProteinID:
UIP34718
LinkDB
All DBs
Position
complement(2092037..2093359)
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AA seq
440 aa
AA seq
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MSKTPTVGFVSLGCPKATVDSERILTQLRMEGYQIVPSYEDADVVVVNTCGFIDSAKAES
LDAIGEAIAENGKVIVTGCMGVDENNIRGVHPSVLAVTGPQQYEQVVNAVHEVVPPSIEH
DPFVDLVPPQGIKLTPRHYAYLKISEGCNHTCSFCIIPSMRGKLVSRPVGDVLSEAERLV
KAGVKEVLVISQDTSAYGVDLKYKLDFWNGQPVKTRMLELCEELGKMGVWVRLHYVYPYP
NVDDVIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKQWREICAELTIRS
TFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPAETMDLEPVPDEIKQDRWD
RFMAHQQAISAARLQLKVGKELDVLIDEVDDDGAIGRSWADAPEIDGMVYVDSEQPLQPG
DKVRVRVTNADEYDLWAEVI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacgccaacagtcgggttcgtcagcctggggtgcccaaaggcaaccgtcgac
tccgaacgcatcctcacccagctgcgcatggagggttaccagatcgtgccgtcctacgag
gatgccgatgtggtggtggtcaatacctgcggcttcatcgacagtgccaaggccgaatcg
ctggacgccattggcgaggcgatcgccgagaacggcaaggtgatcgtcaccggctgcatg
ggcgtggacgagaacaacatccgtggcgtgcaccccagcgtgctggcggttaccggcccg
cagcagtacgagcaggtggtcaatgcggtgcacgaagtggtgccgccgagcatcgagcac
gatcccttcgtcgatttggtgccgccacagggcatcaagctcaccccgcgtcactacgcc
tatctgaagatttccgaaggctgcaaccatacctgcagcttctgcatcatcccctccatg
cgcggcaagctggtcagccgcccggtgggcgatgtgctcagcgaggccgagcgcctggtc
aaggccggcgtcaaggaagttctggtgatcagccaggacaccagcgcctatggcgtcgac
cttaagtacaagctggatttctggaacggccaaccggtcaagacgcgcatgctcgagctg
tgcgaggagctgggcaagatgggcgtctgggtgcgcctgcactacgtctacccctacccc
aacgtcgacgacgtgatcccgctgatggccgccggcaagatcctgccgtacctggacatc
cccttccagcacgccagcccgaaggtactcaaggccatgaagcgtccggccttcgaggac
aagaccctggcgcgcatcaagcagtggcgcgagatctgcgccgagctgaccatccgctcg
acctttattgtcggcttccccggcgagaccgaggaagacttccagtacctgctcgactgg
ctgaccgaagcccagctcgaccgcgtcggctgcttccagtattcgccggtcgaaggcgca
ccggccgagaccatggacctggaaccggtaccggacgagatcaagcaggaccgttgggac
cgcttcatggcgcaccagcaggccatcagcgccgcgcgcctgcagctgaaggtcggcaag
gagctggacgtgttgatcgacgaagtggacgacgacggtgccatcggccgctcctgggcc
gacgccccggagatcgacggcatggtctacgtcgacagcgaacagcctctgcagccgggc
gacaaggtccgcgtgcgtgtcaccaacgccgacgagtacgacctctgggccgaagtgatc
tga
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