Stutzerimonas kunmingensis: LW136_11020
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Entry
LW136_11020 CDS
T08242
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pkg
Stutzerimonas kunmingensis
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkg03400
]
LW136_11020 (phrB)
Enzymes [BR:
pkg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LW136_11020 (phrB)
DNA repair and recombination proteins [BR:
pkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LW136_11020 (phrB)
Prokaryotic type
LW136_11020 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UIP34916
LinkDB
All DBs
Position
complement(2333358..2334788)
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AA seq
476 aa
AA seq
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MTQLLWLRSDLRTSDNTALAAAMACGPTVALYLVTPGQWLAHDDAPCKVDFWLRNLAELS
TRLGALNVPLLIREVDDWQAVPDALLKVCREQGVQRLHYNDEYGVNEQRRDQAVSTHLEA
AGISVRGYLDQLLFTPGSVQTQSGSYFKVFSQFRKACLTHLSVSLPACEPVPATQAPQGI
TSDPIPTTVTGFPRPTDYLRALWPAGEAFAQRRLAAFVEDDLNEYHQRRDLPAEPGTSQL
SAYLAAGVISIRQCLHAALGYNQGELDSGSTGVTTWINELLWREFYKHILVGYPRVSMYR
AFRPETEALPWRRAPYELEAWQQGRTGFPIIDAAMRQMQETGWMHNRLRMVVAMFLSKNL
LIDWREGERWFMRHLIDGDLAANNGGWQWSASTGTDSVPYFRLFNPISQSQRFDPDGQFL
RRWLPELQHLSRRDVHNPSAHRSLFGVTEYPAPIVDLGASRARALDAFRNLPDAQA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgacccagctgctctggctgcgcagcgatctgcgcacaagcgacaacaccgccctcgcg
gctgcgatggcttgcggcccaaccgtggcgctgtatctggtcaccccggggcaatggctc
gcccacgacgatgccccctgcaaagtcgacttctggctgcgtaacctcgccgagctgtcg
acgcggctgggcgcgctcaacgtcccgctgctgattcgcgaggtcgatgattggcaggcg
gtacccgacgcactgctgaaggtctgccgcgaacagggcgtgcagcggctgcattacaac
gacgagtacggggtaaacgagcagcgccgcgatcaggcagtttccacgcacctggaagcg
gccggcatcagtgtgcgcggctatctcgaccagctgctgttcactccgggcagcgtgcag
acgcagtcgggcagctacttcaaggtgttcagccagttccgcaaggcctgcctcacccac
ctgagcgtatcgctgccagcctgcgagccggtgcctgcgacccaggcgccgcagggtatc
accagtgacccgatacccacgacggtcaccggttttccgcgacccacggactatctgcgc
gcgctctggccagccggcgaagccttcgcccagcggcgcctggcagcgttcgtcgaggac
gacctgaacgaataccaccagcgccgcgacctgcccgccgagcccggcaccagccagctg
tcggcctacctcgccgctggcgtcatttccatccgccagtgcctgcacgcggcgcttggc
tacaaccagggcgagctggacagcggcagcaccggcgtcaccacctggatcaacgaactg
ctctggcgcgagttctacaagcacatcctggtcggctatccgcgggtgtccatgtaccgc
gccttccgcccggaaaccgaggcactgccctggcggcgcgcgccgtacgagctggaagca
tggcagcagggccgcaccggctttccgatcatcgatgcggccatgcgccagatgcaggaa
accggctggatgcacaaccgcctgcgcatggtcgtcgccatgttcctcagcaagaacctg
ctgatcgactggcgtgagggcgagcgctggttcatgcgtcacctgatcgacggcgacctg
gcagccaacaatggcggctggcaatggagcgcgtccaccggcacggattcggtgccctac
ttccgcctgttcaatccgatcagccagtcgcaacgcttcgacccggacgggcagttcctg
cgccgctggcttcccgagctgcagcacctgagcaggcgcgacgtgcataacccgtcggcg
caccgcagcctgttcggcgtaaccgagtaccccgcccccatcgtcgacctcggcgccagc
cgggcgcgggcgctggatgccttccgcaacctgccggatgcgcaagcatga
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