Stutzerimonas kunmingensis: LW136_12440
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Entry
LW136_12440 CDS
T08242
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pkg
Stutzerimonas kunmingensis
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkg03032
]
LW136_12440
03400 DNA repair and recombination proteins [BR:
pkg03400
]
LW136_12440
Enzymes [BR:
pkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LW136_12440
DNA replication proteins [BR:
pkg03032
]
Prokaryotic type
DNA Topoisomerases
LW136_12440
DNA repair and recombination proteins [BR:
pkg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LW136_12440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UIP30976
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All DBs
Position
2650188..2651288
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AA seq
366 aa
AA seq
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MRNDTLMDDPVLLAEGTRPVPADETGDTGTLLCPTLPPDLHYVDDSQPGIRRRRLRGKFV
YFEPNGERIRDEEEIRRINKLAIPPAYRDVWICPDAQGHLQATGRDARGRKQYRYHTRWR
EIRDSDKYERMLEFGEALPKLRRDLEKHLARPGMAREKVMALVVMLLESTLIRIGNLRYA
RDNRSYGLTTLRTRHVDVKGTSIRFHFRGKSGVEHEVTLRDRRLARLMRSCMELPGQQLF
QYLDEDGQRRAVSSNDVNLYLREMTGLDFTAKDYRTWAGSALALERLRKLDASTEAVAKQ
NLVETVKQVASQLGNTPAVCRQCYIHPAILQAFSAGELADVRAARKRKWLSAEEVALLAF
LRKAAG
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacgacaccctgatggacgacccggtgctcctggccgagggcactcgccctgtt
cctgccgatgagaccggcgacaccggtacgctactgtgtccaacactgccgccggacctg
cattacgtcgatgattcccagccgggcattcgccgcaggcgactgcgcggcaagttcgtc
tacttcgagccgaacggcgagcgcattcgcgacgaggaggaaattcgtcgcatcaacaag
ctggcgatcccacccgcttatcgtgacgtatggatatgcccggatgctcaagggcatctt
caggcgaccgggcgcgacgcccgtggacggaagcaataccgctatcacacacgttggcga
gagattcgcgacagcgacaagtacgaacgaatgctcgagttcggtgaagccttgccgaaa
ctgcgccgcgatctggaaaaacacctggctagacccggcatggcgcgtgagaaggtcatg
gccctggtggtcatgttgctggagtcgaccctgatccggatcggcaacttgcgctatgcg
agggacaaccgatcctacgggctgacgaccctgcgtacgcgtcacgtggatgtcaaaggc
acctcgatccgcttccactttcgaggcaagagcggcgtggagcacgaagtcaccctgcgc
gaccgtcggttggccaggctgatgcgcagctgcatggagctgccgggccagcagctgttt
cagtacctggatgaagatggtcagcgccgcgcggtcagctccaacgacgtgaacctatat
cttcgcgaaatgaccggtctcgacttcaccgccaaggactatcgcacctgggccggaagc
gcgctggcactggaacggctacgcaagctggacgcatccacggaagccgtcgccaagcag
aatctggtcgagacggtgaagcaggtcgccagccagctgggcaacacccctgcggtctgc
cgccagtgctacatccacccggcgattctgcaagccttcagcgcaggcgagctggctgat
gtgcgcgccgcgcgcaaacgcaagtggctcagcgccgaagaggttgcgttgctggctttt
ctccgcaaagcggcgggctga
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