Entry |
|
Symbol |
gyrA
|
Name |
(GenBank) DNA gyrase subunit A
|
KO |
|
Organism |
pkg Stutzerimonas kunmingensis
|
Brite |
KEGG Orthology (KO) [BR:pkg00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:pkg03032]
LW136_13070 (gyrA)
03400 DNA repair and recombination proteins [BR:pkg03400]
LW136_13070 (gyrA)
Enzymes [BR:pkg01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LW136_13070 (gyrA)
DNA replication proteins [BR:pkg03032]
Prokaryotic type
DNA Topoisomerases
LW136_13070 (gyrA)
DNA repair and recombination proteins [BR:pkg03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LW136_13070 (gyrA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(2788568..2791378)
|
AA seq |
936 aa
MGELAKEILPVNIEDELKQSYLDYAMSVIIGRALPDARDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKVPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNADITIDELMQFIPGPDFPTAGIINGRAGIIEAYRTGRGRI
YIRARADIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGQPRTLNLKELLEAFVRHRR
EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIAVIKASPTPAEAKDALISTAWESSA
VEAMVERAGADACRPEGLDPQFGLRDGKYFLSPEQAQAILDLRLHRLTGLEHEKLLSEYQ
EILTQIGELIRILTNPVRLMEVIREELEGVKRDFGDARRTEILESRLDLTLADLITEEER
VVTISHGGYAKSQPLAAYQAQRRGGRGKAATGVKEEDYVEHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRTSRGRPLVNLLPLDEGERITAMLQVDLEALRKQAAEGEDDLDEAEGL
VIEHDDADDVESDDADSDEKDEPTGSYIFMATANGTVKKTPLVQFSRPRTSGLIALKLEE
GDTLIAAAVTDGAQEVMMFSDGGKVIRFKESKVRIMGRNARGVRGMRLPEGQRIISMLIP
ESGAQILTASLRGYGKRTAMEEFPRRGRGGQGVIAMVTNERNGPLIGAVQVLEGEEIMLI
SDQGTLVRTRVDEVSSLGRNTQGVTLIKLSKGEHLVGLERVQEPSEEDVLEDIEALLDDD
ALEKEMPVLSTEPSEDELLGGAGDVSPDVVPTDDED |
NT seq |
2811 nt +upstreamnt +downstreamnt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctcaagcagtcc
taccttgattacgccatgagcgtgatcattggccgtgcgctgccggacgcgcgcgatggc
ctgaaaccggtacaccgccgcgtactgttcgccatgagcgaactcggcaacgactggaac
aagccgtacaagaaatccgcccgtgtggtcggtgatgtgatcggtaaataccacccgcac
ggcgattcggcggtatacgacaccatcgtgcgtatggctcagccgttctcgctgcgctac
atgctggtcgacggtcagggcaacttcggttcggtcgacggcgatagcgctgcagcgatg
cgttacaccgaagtgcgcatggccaagctggcccatgagctgctggccgacctggaaaag
gaaaccgtcgactgggtgcccaactacgacggcaccgagcagatcccggcggtcatgccg
accaaggttcccaatctgctggtgaacggctccagcggtattgcggtaggcatggcgacc
aacatcccgccgcataacctgggcgaagtgattgatggttgcctggcgctgatcgacaac
gccgatatcactatcgacgaactcatgcagttcatcccgggccccgatttccccactgcc
ggtatcatcaatggccgtgctggcatcatcgaggcctaccgcaccggccgtggccgcatt
tatattcgtgctcgcgccgatatcgaagatatcgacaaggtcggcggccgccagcagatc
gtcatcaccgagctgccttaccagctgaacaaggcacggctgatcgagaagatcgccgag
ctggtgaaagagaagaagatcgaaggcatcaccgagctgcgtgacgagtccgacaaggac
ggcatgcgcgtggtcatcgagctgcgccgcggcgaagtgccggaggtgatcctcaacaac
ctatacgcccagacccagctgcagagtgtcttcggtatcaacgtggttgctctcatcgat
ggccaaccacgcacgctgaacctgaaagagctgctggaagccttcgttcgccaccgtcgc
gaagtcgtcacccgccgtacggtctacgaactgcgcaaggcgcgcgagcgtgggcacatt
cttgaagggcaggcggtcgcgctgtccaacattgatccggtcattgcggtgatcaaggct
tcgccaactccagccgaggccaaggatgcgctgatttccactgcctgggaatcgagcgcc
gttgaagccatggtcgagcgcgcaggggctgatgcctgtcgcccggaaggcctcgatccg
cagtttggcctgcgtgacggcaagtactttctgtcgccggaacaggcgcaggcgattctc
gatctgcgtctgcaccgcctgaccggcctcgagcacgagaagctgctcagcgaataccag
gaaatcctcacccagatcggcgagctgatccgcatcctgaccaatccggttcgcctgatg
gaagtcatccgcgaagaactggaaggcgtgaagcgcgatttcggcgatgcacggcgcacc
gagattctcgagtcgcgtctggacctgacgctggcggacctgatcactgaagaagagcgc
gtcgtcaccatctctcatggtggttatgccaagtcgcaaccgctggccgcctaccaggcg
cagcgccgtggtggtcgcggcaaggctgcgactggtgtgaaggaagaggattacgtcgag
catctgctggttgccaacagtcacaccacgctgctgctgttctccagcaagggcaaagtg
tactggctgaagacctacgagattcccgaagcatctcgcacttcgcgtggccgcccgctg
gtcaacctgctaccgctcgatgagggcgagcgcatcaccgccatgcttcaggtcgatctg
gaagcgctgcgcaagcaggccgccgaaggtgaggacgacctggacgaagcagaaggcctg
gtcatcgagcatgatgatgcggacgacgtcgaaagcgatgacgccgacagcgacgagaaa
gacgagccgaccggctcctacattttcatggctaccgccaatggcacggtcaagaagaca
cctctggtgcagttcagccgtccgcgtacgtccggcctgatcgcgctcaagctggaagaa
ggcgacaccctcatcgctgcggccgtcaccgatggtgcccaggaagtgatgatgttctcc
gacggcggcaaggtcatccgtttcaaggaaagcaaggttcgcatcatgggccgcaatgcc
cgcggtgtacgcggtatgcgtctgcccgaagggcagcgcatcatctccatgctgattccg
gaatcgggtgctcagatccttaccgcatctttgcgtggctacggcaagcgcaccgcgatg
gaagagtttccacgccgcggtcgcggtggtcagggcgtcatcgccatggtcaccaacgag
cgtaacggtccattgatcggtgccgtgcaggtgctcgagggcgaggagatcatgctgatc
tccgatcagggcacgctggtccggacccgcgtcgacgaggtgtcatcgctggggcgcaat
actcagggcgtcaccctcatcaaactgagcaagggcgagcatctggttggtctggagcgc
gtgcaggagccatccgaggaagacgtgctggaagacatcgaagcgttgctcgatgacgac
gccctcgagaaggaaatgcctgtactcagcactgagccgagcgaggatgaactgctcggc
ggggctggcgacgtatctccggatgtggtgccgacagacgacgaagactga |