Stutzerimonas kunmingensis: LW136_14160
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Entry
LW136_14160 CDS
T08242
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pkg
Stutzerimonas kunmingensis
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkg03032
]
LW136_14160 (ihfB)
03036 Chromosome and associated proteins [BR:
pkg03036
]
LW136_14160 (ihfB)
03400 DNA repair and recombination proteins [BR:
pkg03400
]
LW136_14160 (ihfB)
DNA replication proteins [BR:
pkg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LW136_14160 (ihfB)
Chromosome and associated proteins [BR:
pkg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LW136_14160 (ihfB)
DNA repair and recombination proteins [BR:
pkg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LW136_14160 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
CATASP
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
UIP31292
LinkDB
All DBs
Position
complement(3023686..3023970)
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AA seq
94 aa
AA seq
DB search
MTKSELIERIVTQQGLLSSKDVELAIKTMLEQMAQALATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEED
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcggagttgatcgagcgaatcgtcacccagcaggggctgctgtcgtcgaag
gatgtcgagctggccatcaagaccatgcttgagcaaatggctcaggctctggccactggc
gaccggatcgagatccgcggctttggtagcttttccctgcactaccgcgccccccgcgta
ggccgcaatcccaaaaccggccaatccgtcagccttgacggaaaattcgtcccgcatttc
aagcctgggaaggagttgcgcgatcgggtgaatgaggaggactga
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