Stutzerimonas kunmingensis: LW136_18290
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Entry
LW136_18290 CDS
T08242
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pkg
Stutzerimonas kunmingensis
Pathway
pkg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LW136_18290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkg03019
]
LW136_18290
Enzymes [BR:
pkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LW136_18290
Messenger RNA biogenesis [BR:
pkg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LW136_18290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UIP32051
LinkDB
All DBs
Position
complement(3846627..3847952)
Genome browser
AA seq
441 aa
AA seq
DB search
MTFASLGLIDPLLRTLETLDYRKPTPVQAEAIPAVLKGRDLMAAAQTGTGKTAGFALPLL
QRLTMEGAKVASNSVRALVLVPTRELAEQVHESFRVYGQNLPLRTYAVYGGVSINPQMMA
LRKGIDVLVATPGRLLDLYRQNAVGFAQLQALVLDEADRMLDLGFADELDQLFSALPKKR
QTLLFSATFSDAIRQLARELLRDPLSVEVSPRNAAAKTVKQWLVPVDKKRKSELFLHLLA
EKRWGQVLVFVKTRKGVDQLVDELQAAGISSDAIHGDKPQASRLRALERFKAGEVQVLVA
TDVAARGLDIHDLPQVVNFDLPIVAEDYVHRIGRTGRAGATGEAVSLVSADEVDQLAAIE
TLINQVLPRHDELGFVPDHRVPTTTLGGQIIKKPKKPKKPKDGGGKGKIHLGNWFDESEK
PNARPIRKVPSLGGGKPAKKR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcgcctccctgggcctgatcgatccgctgctgcgaaccctggaaaccctcgac
taccgcaagccgacgccggtgcaggccgaagccatccccgccgtgctcaagggccgcgac
ctgatggcggcggcgcagaccggcaccggcaagaccgccggtttcgccctgccgttgctg
cagcgcctgaccatggaaggcgccaaggtggcgagcaattcggtacgcgcgctggtgctg
gtgccgacccgcgagctggccgagcaggtgcacgagagctttcgtgtctacgggcagaac
ctgccgctgcgcacctacgcggtgtatggcggggtcagcatcaacccgcagatgatggcg
ctgcgcaagggcatcgacgtgctggtggcgacccccggccggctgctcgatctgtaccgg
cagaacgccgtgggcttcgcccagctgcaggcgctggtgctcgacgaggccgatcgcatg
ctcgacctcggtttcgccgacgagctggatcagctgttctcggccctgccgaagaagcgc
cagaccctgctgttctccgcgaccttctccgatgcgatccgccagctggcccgcgagctg
ctgcgcgacccgctatcggtcgaggtcagcccacgcaacgccgcggcgaagacggtcaag
cagtggctggtgccagtggacaagaagcgcaagtccgagctgttcctgcatctgctggcg
gagaagcgctggggccaggtgctggtgttcgtcaagacgcgcaagggtgtcgatcagctg
gtggacgagctgcaggctgcgggcatttccagcgatgcgatccacggcgacaaaccacag
gcctcgcggctgcgcgcgctggagcgcttcaaggcgggcgaggtgcaggtgctggtggcg
accgacgtcgccgcgcgcgggctggacatccatgatctgccgcaggtggtcaacttcgac
ctgccgatcgtcgctgaggactacgtgcaccgcatcggccgcaccggtcgggcgggtgcc
acgggcgaggcggtatcgctggtcagcgccgatgaagtcgatcagctggcggccatcgag
accctgatcaaccaggtgctgccgcgccacgacgagctgggcttcgtgccggaccatcgt
gtgccgaccaccacgctgggcgggcagatcatcaagaagccgaagaaaccgaaaaagccc
aaggacggcggcggcaagggcaagattcatctcggcaactggttcgacgagagcgaaaag
cccaacgccaggccgattcgcaaggtgccgagcctgggcggcggcaagccggcgaagaag
cgctga
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