Stutzerimonas kunmingensis: LW136_18635
Help
Entry
LW136_18635 CDS
T08242
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pkg
Stutzerimonas kunmingensis
Pathway
pkg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LW136_18635 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkg03400
]
LW136_18635 (uvrA)
DNA repair and recombination proteins [BR:
pkg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LW136_18635 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LW136_18635 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
BCA_ABC_TP_C
AAA_23
nSTAND1
AAA_16
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
AAA_21
Viral_helicase1
cobW
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UIP32120
LinkDB
All DBs
Position
3916541..3919384
Genome browser
AA seq
947 aa
AA seq
DB search
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRC
PDHDAPLEAQTVSQMVDQVLALPEGRKLMLLAPVIRERKGEHLAVFDELRAQGFVRARVN
GRLYELDELPKLDKQKKHSIDVVVDRFKVRGDLQQRLAESFETALKLADGIALVASMDED
DDSEEMIFSARFACPICGHSISELEPKLFSFNNPAGACPTCDGLGVKQFFDAKRLVNGEL
TLAEGAIRGWDRRNVYYFQMLGSLASHYGFSLDEPFDSLAADHQKSILRGSGRENVEFRY
LNDRGDIVKRSHPFEGIVPNLERRYRETESNSVREELAKYLSTQPCPDCRGTRLRREARH
VWVGDKTLPAVTAMPIGDATDYFGVLSLNGRRGEIADKILKEIRERLQFLVNVGLDYLTL
DRSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLGTLRHLRDIGNT
VIVVEHDEDAIRLADYVVDIGPGAGIHGGRIVAEGTPDEVMAHPDSLTGKYLSGRVKINY
RPERTRRDPKMLLKLKGARGNNLRNVDLEIPVGLLTCITGVSGSGKSTLINNTLFPITAT
ALNGATTLEVAPHDSFDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPE
ARSRGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEVKY
KGKSITEVLDMTIEEAREFFDPVPAVARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKL
SRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADW
LVDLGPEGGSKGGQIIACGTPEEVAGMAQSHTGHFLKPLLERDRSAG
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
ttggacaagattctgattcgtggggcccgcacccacaacctgaagaacatcgacctcacc
ctgccgcgcgacaagctgatcgtcatcaccggcttgtccggttctggcaaatcatcgttg
gcattcgacactctctacgcagaaggccagcgccgttacgtcgaatcgctttcggcgtat
gcgcgccagttcctctcgatgatggaaaagcccgacgtcgacaccattgaggggctctcc
ccggcgatctctatcgagcagaaatcgacctcgcacaacccgcgctccaccgtgggcacc
atcaccgagatctacgactacctgcgtctgctctatgcgcgggtcggcacgccgcgctgt
ccagatcacgatgccccgttggaagcgcagacggtcagtcagatggtcgaccaggtgctg
gcactgcccgaaggccgcaagctgatgctgctggccccggtcatccgcgaacgcaagggc
gagcacctggccgtgttcgacgaactgcgtgctcagggtttcgtgcgcgcccgcgtcaac
gggcggctgtacgaactcgacgagctacccaagctggacaagcagaagaagcactcgatc
gacgtggtggtggatcgcttcaaggttcgcggcgacctgcagcagcgcctggccgaatcc
ttcgaaacggcgctcaagctggccgatggcatcgccctggtcgcctccatggacgaggac
gacgacagcgaggaaatgatcttctccgcacgcttcgcctgcccgatctgcggccactcg
atcagcgagcttgagcccaagctgttctccttcaacaacccagccggcgcctgccccacc
tgtgacggcctgggcgtgaagcagttcttcgacgccaagcgcctggtcaatggcgagctg
accctggccgaaggcgccatacgcggctgggaccggcgcaacgtttactatttccagatg
ctcggctcactggcctcgcattatggcttcagcctcgatgagcctttcgactcactggcc
gccgatcatcagaagtccatcctgcgcggcagcggccgtgagaatgtcgagttccgctac
ctcaacgaccgcggcgatatcgtcaagcgttcgcacccgttcgaaggcatcgttcccaac
ctggaacgccgctaccgcgaaaccgaatccaattcggttcgcgaagagctcgccaaatac
ctcagcacccagccctgcccggactgtcgcggcacgcgtctgcgccgtgaagcacgccac
gtgtgggttggcgacaagaccctgcctgcggtcacggccatgcccatcggcgacgccacc
gactacttcggcgtcctctcgctcaacggacgacgcggcgagatcgccgacaagattctc
aaggagatccgcgaacgcctgcagttcctggtcaacgtcggcctggattatctgaccctg
gatcgcagcgccgacaccctgtccggcggcgaagcccagcgtattcgcctggccagtcag
atcggcgccggcctggttggggtgatgtacatcctcgacgaaccttcgatcggcctgcat
cagcgcgacaacgaacgcttgctgggcacccttcgccacctgcgcgacatcggcaatacg
gtgatcgtcgtggagcatgacgaggatgcgatccgtctcgccgactacgtcgtagacatc
ggcccaggtgccggcatacatggcggccgcatcgtcgctgaaggcacacctgacgaggtg
atggcgcacccggattcgctgaccggcaagtacctctctggccgggtgaagatcaactat
cggcctgagcgcacccgccgtgatccgaagatgctgctcaagctcaagggcgcgcgtggc
aacaacctgcgcaacgtcgacctggagattccggtcggcctgctcacctgcatcaccggt
gtgtcgggctcgggcaaatcaacgctgatcaacaacacgctgttcccgatcacggcgact
gcactcaatggcgcgaccacgctggaagtagccccgcacgacagcttcgacgggctgcag
catctggacaaggtagtggacatcgatcagagcccgatcggccgcaccccgcgctccaac
ccggcgacctacacggggctgttcacgccgattcgcgagctgtttgccggcgtgccggaa
gcgcgctcacgcggctacggcccgggccgcttctctttcaacgtcaagggcggacgctgt
gaagcctgccagggcgacggcgtgatcaaggtggaaatgcactttctgcccgacatctac
gtgccctgcgacgtgtgcaagggcaagcgctacaaccgcgaaacgctggaggtgaagtac
aagggcaagagcatcaccgaagtgctcgacatgaccatcgaggaagcccgcgagttcttc
gatccggtgccggccgtcgcgcgaaaactgcagacgctgatggatgttgggctgtcctac
atcaagctggggcagagtgcgacgaccctgtctggcggtgaggcgcagcgcgtcaagctg
tcccgcgagctgtccaagcgtgacacgggcaagacgctgtacatccttgatgaacccacc
accggcctgcatttcgccgatatccagcagctgctcgacgtactgcaccgtctgcgcgac
cacggcaatacggtcgtggtgattgagcacaaccttgacgtcatcaagacggccgactgg
ctggtggatctcggcccggaaggcggctcgaagggtggccagataatcgcctgcggtacg
ccggaagaggtggcaggcatggcccagtctcataccggtcatttcctcaaaccgttactc
gagcgcgaccgctcggcgggttga
DBGET
integrated database retrieval system
