| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
pkg Stutzerimonas kunmingensis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pkg00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LW136_18815 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pkg03021]
LW136_18815 (rpoC)
03400 DNA repair and recombination proteins [BR:pkg03400]
LW136_18815 (rpoC)
Enzymes [BR:pkg01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LW136_18815 (rpoC)
Transcription machinery [BR:pkg03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LW136_18815 (rpoC)
DNA repair and recombination proteins [BR:pkg03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LW136_18815 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(3940750..3944949)
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| AA seq |
1399 aa
MKDLLNLLKNQGQIEEFDAIKIALASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMAHIELASPVAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARM
GAEAVRELLIQIDLEHEIGRLREEIPQTNSETKIKKLSKRLKLMEAFHGSGNLPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLSAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT
LRLHQCGLPKKMALELFKPFIFGKLEMRGMATTIKAAKKMVERELPEVWDVLAEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTREAINAKGEGRVFADLQEVDRVFRAG
EASLHARVKVRINETIKDRDGSITKNTRIVDTTVGRALLFQIVPAGLSFDVVNQPMKKKA
ISKLINLCYRTVGLKDTVIFADQLMYTGFAYSTISGVSIGVNDFVIPDEKARIIDAATEE
VKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMANLSKEKVIDRDGNEAEQDSFN
SMYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEVDCGTEQGLFMTPHIEGGDVVEPLGERVL
GRVIARDVLKPGTDDVLVPAGTLVDEQWVDFIELNSIDEVVVRSPISCETRYGICAKCYG
RDLARGHQVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAVDNVMVKNGGTIRL
HNLKHVERADGALVAVSRSGELAVADDFGRERERYKLPYGAVISVKEGDKVDAGAVVAKW
DPHTHPIVTEMKGVVTFVGMEENITIKRQTDELTGLTNIEVMDPKDRPASGKDIRPAIKM
VDANGKELLLPGTDVPAQYFLPANALVGVADGAEINVGDVIARIPQETSKTRDITGGLPR
VADLFEARRPKEPSILAEISGTISFGKETKGKRRLVITPTDGSDPYEELIPKWRHLNVFE
GEQVNKGEVISDGPSNPHDILRLLGVSALAKYIVNEIQDVYRLQGVKINDKHIETILRQM
LRKVEISESGDSSFIKGDQMELTQVLEENERLSDDDKFVSKYVRVLLGITKASLSTESFI
SAASFQETTRVLTEAAVTGKRDYLRGLKENVVVGRLIPAGTGLQYHSERKRKREADKPVR
VSADEVEAALTEALNSSGN |
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| NT seq |
4200 nt +upstreamnt +downstreamnt
ttgaaagacttgctgaatctgttgaaaaaccagggtcaaatcgaagagttcgatgccatc
aagattgccctggcttcgcccgagatgatccgttcctggtccttcggtgaagtaaagaag
ccggaaaccatcaactaccgtacgttcaagccggagcgcgacggtctgttctgcgccaag
atctttggtccggtaaaggactacgagtgcctgtgcggtaagtacaagcgcctcaagcac
cgcggtgtcatctgcgagaagtgtggtgtggaagtcgcactggccaaggtacgccgcgag
cgcatggcgcacatcgagctggcttcgccggtcgcccacatctggttcctgaagtcgctg
ccgtcccgtatcggtctgctgctggacatgactctgcgcgacatcgagcgcgtgctctat
ttcgaaagctatgtcgttatcgatccgggcatgactaccctggaaaagggtcagctgctt
aatgacgagcagtacttcgaagcgctggaagagttcggtgacgacttcgatgcccgcatg
ggtgccgaggctgtgcgcgagctgttgatccagatcgacctggagcacgaaatcggtcgc
ctgcgcgaggaaatcccgcagaccaactccgaaaccaagatcaagaagctctccaagcgt
ctgaagctgatggaagcgttccacggctcgggcaacctgccggagtggatgatcctcacc
gtgctgccagtactgccgccggatctgcgtccgttggttccgctggatggcggtcgtttc
gcgacttcggatctcaacgatctgtatcgccgcgtgatcaaccgtaacaaccgtttgaag
cgtctgctcgacctgtcggcgccggacatcatcgtgcgcaacgagaagcgcatgctgcag
gaagccgtcgatgcgttgctggataacggccggcgcggtcgagccatcaccggctcgaac
aagcgtccgctgaagtccctggctgacatgatcaagggtaagcagggtcgcttccgtcag
aacctgctcggtaagcgcgtggactactccggtcgttccgtgatcaccgtgggcccgact
ctgcgtctgcatcagtgcggtctgccgaagaagatggctctcgagctattcaagccgttt
attttcggcaagctcgaaatgcgcggcatggccaccaccatcaaggcggccaagaagatg
gtagagcgcgagctgcccgaggtctgggacgttctcgccgaagtcattcgcgaacaccct
gtgctgctcaaccgcgcaccgaccctgcaccgtctgggtatccaggcgtttgagccggtg
ctgatcgaaggcaaggcgattcagctgcacccgctggtctgcgccgcgtacaacgccgac
ttcgacggtgaccagatggccgtgcacgtaccgctgaccctggaagcccagctggaagcg
cgcgcgctgatgatgtcgaccaacaacatcctttcgccagcgaacggcgagccgatcatc
gttccgtcgcaggacgtggttttgggtctgtactacatgacccgtgaagccatcaacgcg
aagggggaaggccgggtcttcgcggatctgcaggaagtcgaccgtgtcttccgcgccggc
gaagcgtcgctgcacgcccgggtgaaggtgcgcatcaacgaaaccatcaaggatcgtgac
ggcagcatcaccaagaacacccgtatcgtcgacaccactgtgggtcgcgcgctgctgttc
cagatcgtgccggccggcctgtcgttcgacgtggtcaaccagccgatgaagaagaaagca
atctccaagctgatcaacctgtgctaccgcactgttggcctgaaggacactgtgatcttc
gccgaccagctgatgtacaccggtttcgcctactcgactatctccggtgtttccatcggc
gtgaatgacttcgtcattccggatgagaaggcacgcatcatcgatgcggcaaccgaggaa
gttaaggagatcgaaagccagtacgcttccggcctggtaacccagggcgagaagtacaac
aaggtgatcgacctttggtccaaggccaacgatgaagtctccaaggcgatgatggccaac
ctctccaaggagaaggtcattgatcgtgatggtaacgaagccgagcaggactcgttcaac
tcgatgtacatgatggccgactcgggcgcgcggggttccgctgcgcagattcgtcagctc
gccggtatgcgtggtctgatggccaagccggacggctcgatcatcgaaacgccgattacc
gcgaatttccgtgaaggtctgaacgtactccagtacttcatctccactcacggtgcgcgt
aaaggtctggcggataccgccctgaaaaccgcgaactctggttacctgacccgtcgtctg
gtcgatgtcgcgcaggatctggtcgttaccgaagtggattgcggtaccgagcagggcctg
ttcatgaccccgcacattgaaggcggtgacgtcgtcgaaccgctgggtgagcgcgtactt
ggccgcgtgatcgcgcgtgacgtgctcaagccgggcaccgatgatgtactggtaccggct
ggtacgttggtcgacgagcagtgggtcgacttcatcgagctgaacagcatcgacgaagtg
gtcgtgcgttcgccgatttcctgcgaaacccgctacggtatctgcgccaagtgctacggc
cgcgacctggcccgtgggcatcaggtgaacatcggtgaggcagtgggcgttatcgctgcg
cagtccatcggtgagccgggtactcagctgaccatgcgtacgttccacatcggtggtgcg
gccagccgtacttctgctgtcgacaacgtcatggtgaagaacggcggcaccattcgtctg
cataacctgaaacacgttgaacgtgccgatggtgcgctggtggcggtatcccgctccggt
gagctggcggtggccgacgacttcggtcgtgagcgcgagcgctacaagctgccgtacggc
gcggtgatttccgtcaaggaaggcgacaaggtcgatgcgggtgctgtggtcgccaagtgg
gacccgcacactcacccgatcgtcaccgagatgaagggtgtcgtgaccttcgtcggcatg
gaagagaacatcaccatcaagcgccagaccgacgagttgaccggtctgaccaacatcgaa
gtgatggatccgaaggaccgtccggcatcgggcaaagacattcgcccagcgatcaagatg
gtcgacgccaatggtaaggaactgctgctgccgggtaccgacgtgcctgctcagtacttc
ctgccggctaacgccctggtgggtgtggctgacggtgccgagatcaacgtgggtgacgtc
atcgcacgtatcccgcaggaaacttcgaagacccgcgatatcaccggtggtctgccgcgc
gttgctgacttgttcgaagcacgtcgtccgaaggagccgtccatcctggcggaaatcagc
ggtacgatttccttcggcaaggaaaccaagggcaagcgccgcctggtgatcacgcctaca
gacggcagcgatccgtacgaggaactgattccgaagtggcgtcacctcaacgtcttcgaa
ggcgagcaggtgaacaagggcgaggtcatctctgatggcccgagcaacccgcatgacatc
cttcgtctcttgggtgtcagtgcgctggccaagtacatcgtcaatgaaattcaggacgtg
taccgtctgcaaggtgtgaagatcaacgacaagcacatcgagaccatcctgcggcaaatg
ctgcgcaaggttgagatcagtgagtcgggcgattccagcttcatcaagggtgaccagatg
gagctgacccaggtattggaagaaaacgagcgtttgagcgacgacgacaagttcgtctcc
aagtacgtccgcgttctgctgggtatcaccaaggcatcgttgtcgaccgagtcgttcatt
tctgcggcgtcgttccaagaaacaacgcgtgttctgaccgaggctgccgttactggcaag
cgcgattatctgcgcggtctcaaggaaaacgtggtcgtgggtcgcctgattccagctggt
acgggcctgcagtatcacagcgagcgtaagcgcaagcgtgaagccgacaagcccgttcgc
gtgagcgccgatgaggtcgaagcagctctgaccgaggcgttgaactccagcggtaactaa |
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