Stutzerimonas kunmingensis: LW136_21440
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Entry
LW136_21440 CDS
T08242
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pkg
Stutzerimonas kunmingensis
Pathway
pkg03420
Nucleotide excision repair
pkg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LW136_21440 (uvrD)
03430 Mismatch repair
LW136_21440 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkg03400
]
LW136_21440 (uvrD)
Enzymes [BR:
pkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LW136_21440 (uvrD)
DNA repair and recombination proteins [BR:
pkg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LW136_21440 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LW136_21440 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
DUF3553
Motif
Other DBs
NCBI-ProteinID:
UIP32643
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All DBs
Position
4478177..4480366
Genome browser
AA seq
729 aa
AA seq
DB search
MHDDLSLLLNSLNDAQRQAVAAPLGRQLVLAGAGSGKTRVLVHRIAWLHQVERASLHSIL
SVTFTNKAAAEMRQRIEQLLHVNPQGMWVGTFHGLAHRLLRAHWQEAKLAQNFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWWINAQKDEGLRPRNIQAGGDLFLATQLKIYEAYE
EACARAGVIDFSELLLRALDLWRDHPGLLDHYQRRFRHVLVDEFQDTNAVQYAWLRLLAK
GGESLMVVGDDDQSIYGWRGARIENLHQFSQDFPDAETIRLEQNYRSTACILKAANALIA
NNQGRLGKELWTSGCEGEPISLYAAFNEHDEARYVVESIEKAIRDGMSRSEIAILYRSNA
QSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLIQTRDNDAALERVINVPARGI
GEKTVEALRQLARDQGLSMWAALHQAVGTKAVSGRAASALNAFVELVDTLALKVEGMQLH
NMAQLVIEQSGLLAYHRDEKGEKAQARVENLEELVSAARAFDSYSEEDDDVQSPLAAFLD
HASLEAGEQQAGDHEDSVQLMTLHSAKGLEFPLVFLVGMEEGLFPHKMSLEESGRLEEER
RLAYVGITRAMQQLVITYAETRRLYGSETYNKISRFVREVPPALIQEVRLSNTVTRSFSG
KSMSGSSLFDGAGVPETPFSLGQRVRHSLFGEGTILNFEGSGAQARVQVNFEDEGSKWLM
LSYAKLEAL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgatctctctctcctcctgaattccctcaacgatgctcagcgccaggccgtg
gccgcgccgcttggccgccagttggtattggctggtgccggctcgggcaagacccgcgtt
ctggtgcaccgtatcgcctggctgcaccaggtcgagcgcgcctcgctgcactcgatcctg
tcggtgaccttcaccaacaaggctgccgccgagatgcgccagcgcatcgagcagctgctg
cacgtgaacccgcagggcatgtgggtgggcacctttcacggcctggcccaccgcctgctg
cgcgcgcactggcaggaagccaagctggcgcagaacttccagatcctcgattccgacgac
cagcagcggctggtcaaacgggtgatccgcgaactcggcctcgacgagcaacgctggccg
gcgcgccaggcgcagtggtggatcaacgcgcagaaggacgaaggcctgcgtccgcgcaac
atccaggccggcggtgacctgttcctcgccacccagctgaagatctacgaagcctatgaa
gaggcctgcgcccgcgccggggtgatcgatttctccgagctgctgctgcgcgccctggac
ctgtggcgcgaccacccgggcctgctcgatcactaccagcggcgtttccgccacgtgctg
gtggacgaattccaggacaccaacgccgtgcagtacgcctggttgcggctgctggccaag
ggtggcgaaagtctgatggtggtcggcgacgacgaccagtcgatctacggctggcgcggc
gcgcggatcgagaacctgcaccagttcagccaggatttcccggatgccgaaaccatccgc
ctggagcagaactaccgctccaccgcctgcatcctcaaggccgccaacgcgctgatcgcc
aacaaccagggccgtctcggcaaggaactctggacttccggctgcgagggcgagccgatc
agcctgtacgccgcgttcaacgagcacgacgaagcgcgctacgtggtcgagagcatcgag
aaggccatccgcgacggcatgagccgcagcgagatcgccatcctctaccgctccaacgcc
cagtcgcgggtgctggaagaggcgctgctgcgcgagaagatcccctaccgcatctatggc
ggccagcgcttcttcgagcgcgccgagatcaagaacgccatggcctacctgcgcctgatc
cagacccgcgacaacgacgcggcgctggaacgggtgatcaacgtgccggcgcgcggcatc
ggcgagaagaccgtcgaagcactgcgccagctggcgcgtgatcagggcctgtcgatgtgg
gcggcgctgcatcaggcggtcggtaccaaggcggtttctggccgcgctgccagcgcgttg
aacgcctttgtcgagctggtcgataccctggcgctgaaggtcgaaggcatgcagctgcac
aacatggcgcagctggtcatcgagcagtccgggctgcttgcctatcaccgcgacgagaag
ggcgagaaagcccaggcgcgggtggaaaacctcgaggaactggtctccgccgcgcgcgcc
ttcgacagctacagcgaagaggacgacgacgtccagtcaccgctggcggcctttctcgac
cacgcctcgctggaggccggcgaacagcaggccggcgaccacgaggacagcgtgcagctg
atgacgctgcacagcgccaaaggcctggagttcccgctggtgttcctggtcggcatggaa
gaaggcctgttcccgcacaagatgagcctggaggagtccggccgtctggaagaagagcgc
cgcctggcctacgtcggcatcacccgcgccatgcagcagctggtgatcacctacgccgaa
acgcgccggctgtacggcagcgagacctataacaagatctcgcgtttcgtccgcgaagtg
ccgccggcactgatccaggaagtacgtctgagcaataccgtgacgcgctcgttcagcggc
aagagcatgagcggctcgtcgctgttcgacggcgccggcgtgccggaaacgccgttcagc
ctcggccagcgtgtacgccattcgctgttcggcgaaggcaccatcctcaacttcgaaggc
tccggcgcccaggcccgggtgcaggtgaatttcgaggatgagggcagcaaatggctgatg
ctcagttacgcaaaacttgaagccctctag
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