Entry |
|
Symbol |
polA
|
Name |
(GenBank) DNA polymerase I
|
KO |
|
Organism |
pkg Stutzerimonas kunmingensis
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pkg00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LW136_21770 (polA)
03410 Base excision repair
LW136_21770 (polA)
03420 Nucleotide excision repair
LW136_21770 (polA)
03440 Homologous recombination
LW136_21770 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:pkg03032]
LW136_21770 (polA)
03400 DNA repair and recombination proteins [BR:pkg03400]
LW136_21770 (polA)
Enzymes [BR:pkg01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LW136_21770 (polA)
DNA replication proteins [BR:pkg03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LW136_21770 (polA)
DNA repair and recombination proteins [BR:pkg03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LW136_21770 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LW136_21770 (polA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(4553603..4556347)
|
AA seq |
914 aa
MSQAPLILVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRRQYPDSPFAVVFD
AKGPTFRDALFENYKSHRPPMPDDLRSQVEPLHASVRALGMPLLCVEGVEADDVIGTLAR
QCAALGRDVIISTGDKDMAQLVCPHVTLVNTMTGSVYDIEGVKNKFGVGPELIIDFLALM
GDKVDNIPGVPGVGEKTACGLLNGIPGGLKGLYDNLDQVAGLPIRGAKSLGAKLAEHRDA
AFMSYELATIKLDVPLDVEVADLMPGEPHREALIALYRELEFKNWLDDLLREAKAAGENC
EVQPEGCSIQAEAEYTTILDPAEFDAWLERLKNAECFAFDTETTSIDAQRAELVGVSFAV
EPGQAAYVPLRHSYMGVPQQLELDAVLGALKPLLEDPAKTKICQHGKYDMNVLMHYGIEM
RGMTFDTMLESYVLDATATRHDMDSLALKYLGRGTIRFEDIAGKGAKQLTFDQIAIEQAG
PYAAEDADVTLRLHQTLLGKLEQTPSLLKVLTEIEMPLVPVLARIERNGALVDAQLLGQQ
SVELGDKLVQLEREAFDIAGEEFNLGSPKQLCAILYDKLGCPVISKTAGGQPSTAESVLA
ELAEQDYPLPKVIMQHRSLSKLKGTYTDKLPQQINPRTGRIHTSYHQAVTATGRLSSSDP
NLQNIPIRTAEGRRIRQAFIAAPGYKLLAADYSQIELRIMAHLAQDAGLLHAFQNDLDVH
RATAAEVFGVPLEQVSNDQRRSAKAINFGLIYGMSAFGLAKQIDVGRKEAQEYIDRYFAR
YPGVLAYMERTRTQAAEQGYVETLFGRRLYLPEINSKNGAMRKGAERTAINAPMQGTAAD
IIKRAMIAVDGWLQDSGLDARVILQVHDELVLEVREDLVEPVRQQICPLMSEAAQLDVPL
LVEAGVGNNWDEAH |
NT seq |
2745 nt +upstreamnt +downstreamnt
atgagccaagctcccctcatcctggtggacggttcgtcctacctctatcgcgccttccat
gccctgcctcctctgaccacctccaccggaaagccgaccggcgcggtcaagggcgtgctg
aacatgctgctcagcctgcgtcggcaatacccggacagtccgttcgcggtggttttcgat
gccaaggggccaaccttccgcgacgcgctgttcgagaactacaagtctcatcgtccgccg
atgccggatgacctgcgctcccaggtcgagccgctgcatgccagcgtccgcgccctcggc
atgccgctgctgtgcgtggaaggcgtggaggccgacgacgtcattggcaccctggcgcgt
cagtgcgcggcgctcggccgcgacgtgatcatctccaccggcgacaaggacatggcgcag
ctggtctgtccgcacgtcaccctggtcaacaccatgaccggcagcgtttatgacatcgaa
ggcgtgaagaacaagttcggcgtcggcccggagctaatcatcgacttccttgcgctgatg
ggcgacaaggtcgacaacattccgggcgtgccaggcgtgggtgaaaagactgcctgtggc
ctgctcaacggtattcccggcgggctcaaggggctttacgacaacctcgaccaggtcgcc
ggcctgccgatccgcggcgccaagtcactgggcgccaagctcgccgaacaccgcgacgcc
gccttcatgtcctatgagctggcgaccatcaagctcgacgtgccgctggacgtcgaggtc
gccgacctgatgcccggcgagccgcaccgcgaggcgctgattgcgctgtaccgcgagctg
gaattcaagaactggctggacgacctgctgcgcgaggccaaggccgccggcgagaactgc
gaggtgcagcccgaaggctgctcgatccaggccgaagccgagtacaccacgatcctcgat
ccggccgagttcgatgcctggctcgagcgcctgaagaacgccgagtgcttcgccttcgat
accgaaaccaccagcatcgatgctcagcgcgccgagctggtcggcgtgtcgttcgccgtc
gagccgggccaggcggcctacgtgccgctgcgtcattcctatatgggtgtgccgcagcag
ctcgagcttgatgccgtgcttggcgcgctcaagccgctgctggaggatccggcgaagacc
aagatctgccagcacggcaaatacgacatgaacgtgctgatgcactacggcatcgagatg
cgcggcatgaccttcgacaccatgctcgaatcctacgtgctggacgccaccgccactcgc
cacgacatggatagcctggcgctgaagtacctcggccgtggcaccatccgcttcgaggac
atcgccggcaagggcgccaagcagctgaccttcgaccagatcgccatcgagcaggcgggg
ccctacgctgccgaggacgccgatgtcaccctgcgcctgcaccagaccctgctcggcaag
ctggagcagacgccatcgctgctcaaggtgctgaccgagatcgagatgccgctggtgccg
gtgctggcgcgcatcgagcgcaacggtgcgctggtcgatgcgcagctgctcggccagcag
agcgtcgagctgggcgacaaactggtgcagctggaacgcgaggccttcgatattgccggc
gaggagttcaacctcggctcgcccaagcagctctgcgcgatcctctatgacaagctcggc
tgcccggtaatctccaagaccgccggcggccagccgtccaccgcggaaagcgtgctggcc
gaactggccgagcaggattacccgctgcccaaggtgatcatgcagcaccgctccttgagc
aagctcaagggcacctacaccgacaagctgccgcagcagatcaacccgcgcaccgggcgc
atccacaccagctaccaccaggcggtgaccgccaccggccggctgtcctccagcgacccg
aacctgcagaacatcccgatccgcaccgctgagggccggcgtattcgccaggccttcatc
gcggcgccgggctacaagctgctcgcggccgactactcgcagatcgagctgcgcatcatg
gctcatctggcgcaggatgccggtctgctgcacgctttccagaacgacctcgacgtgcac
cgcgccaccgctgccgaggtgttcggcgtgccgctggagcaggtcagcaacgaccagcga
cgcagcgccaaggcgatcaacttcggcctgatctacggcatgagcgctttcggcctggcc
aagcagatcgacgtcggccgcaaggaagcgcaggagtacatcgaccgttatttcgcccgt
taccccggcgtgctggcctacatggagcgcacccgcacccaggccgccgagcagggctat
gtcgagacgctgttcggtcggcggctgtacctgccggagatcaattcgaagaacggcgcc
atgcgcaagggcgccgagcgcaccgcgatcaacgcgccgatgcagggcaccgcagcggac
atcatcaagcgcgccatgatcgctgtggacggctggctgcaggacagtgggctggatgcg
agggtgatcctgcaggtccacgatgaattggtgctggaagtgcgcgaagacctggtcgag
ccggtccgccagcagatctgtccgttgatgagcgaggcggcccagctggacgtaccgctg
ctggtcgaagcgggcgttggcaacaactgggacgaggcgcactga |