KEGG   Stutzerimonas kunmingensis: LW136_21770
Entry
LW136_21770       CDS       T08242                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pkg  Stutzerimonas kunmingensis
Pathway
pkg03030  DNA replication
pkg03410  Base excision repair
pkg03420  Nucleotide excision repair
pkg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pkg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LW136_21770 (polA)
   03410 Base excision repair
    LW136_21770 (polA)
   03420 Nucleotide excision repair
    LW136_21770 (polA)
   03440 Homologous recombination
    LW136_21770 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pkg03032]
    LW136_21770 (polA)
   03400 DNA repair and recombination proteins [BR:pkg03400]
    LW136_21770 (polA)
Enzymes [BR:pkg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LW136_21770 (polA)
DNA replication proteins [BR:pkg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LW136_21770 (polA)
DNA repair and recombination proteins [BR:pkg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LW136_21770 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LW136_21770 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: UIP32706
LinkDB
Position
complement(4553603..4556347)
AA seq 914 aa
MSQAPLILVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRRQYPDSPFAVVFD
AKGPTFRDALFENYKSHRPPMPDDLRSQVEPLHASVRALGMPLLCVEGVEADDVIGTLAR
QCAALGRDVIISTGDKDMAQLVCPHVTLVNTMTGSVYDIEGVKNKFGVGPELIIDFLALM
GDKVDNIPGVPGVGEKTACGLLNGIPGGLKGLYDNLDQVAGLPIRGAKSLGAKLAEHRDA
AFMSYELATIKLDVPLDVEVADLMPGEPHREALIALYRELEFKNWLDDLLREAKAAGENC
EVQPEGCSIQAEAEYTTILDPAEFDAWLERLKNAECFAFDTETTSIDAQRAELVGVSFAV
EPGQAAYVPLRHSYMGVPQQLELDAVLGALKPLLEDPAKTKICQHGKYDMNVLMHYGIEM
RGMTFDTMLESYVLDATATRHDMDSLALKYLGRGTIRFEDIAGKGAKQLTFDQIAIEQAG
PYAAEDADVTLRLHQTLLGKLEQTPSLLKVLTEIEMPLVPVLARIERNGALVDAQLLGQQ
SVELGDKLVQLEREAFDIAGEEFNLGSPKQLCAILYDKLGCPVISKTAGGQPSTAESVLA
ELAEQDYPLPKVIMQHRSLSKLKGTYTDKLPQQINPRTGRIHTSYHQAVTATGRLSSSDP
NLQNIPIRTAEGRRIRQAFIAAPGYKLLAADYSQIELRIMAHLAQDAGLLHAFQNDLDVH
RATAAEVFGVPLEQVSNDQRRSAKAINFGLIYGMSAFGLAKQIDVGRKEAQEYIDRYFAR
YPGVLAYMERTRTQAAEQGYVETLFGRRLYLPEINSKNGAMRKGAERTAINAPMQGTAAD
IIKRAMIAVDGWLQDSGLDARVILQVHDELVLEVREDLVEPVRQQICPLMSEAAQLDVPL
LVEAGVGNNWDEAH
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgagccaagctcccctcatcctggtggacggttcgtcctacctctatcgcgccttccat
gccctgcctcctctgaccacctccaccggaaagccgaccggcgcggtcaagggcgtgctg
aacatgctgctcagcctgcgtcggcaatacccggacagtccgttcgcggtggttttcgat
gccaaggggccaaccttccgcgacgcgctgttcgagaactacaagtctcatcgtccgccg
atgccggatgacctgcgctcccaggtcgagccgctgcatgccagcgtccgcgccctcggc
atgccgctgctgtgcgtggaaggcgtggaggccgacgacgtcattggcaccctggcgcgt
cagtgcgcggcgctcggccgcgacgtgatcatctccaccggcgacaaggacatggcgcag
ctggtctgtccgcacgtcaccctggtcaacaccatgaccggcagcgtttatgacatcgaa
ggcgtgaagaacaagttcggcgtcggcccggagctaatcatcgacttccttgcgctgatg
ggcgacaaggtcgacaacattccgggcgtgccaggcgtgggtgaaaagactgcctgtggc
ctgctcaacggtattcccggcgggctcaaggggctttacgacaacctcgaccaggtcgcc
ggcctgccgatccgcggcgccaagtcactgggcgccaagctcgccgaacaccgcgacgcc
gccttcatgtcctatgagctggcgaccatcaagctcgacgtgccgctggacgtcgaggtc
gccgacctgatgcccggcgagccgcaccgcgaggcgctgattgcgctgtaccgcgagctg
gaattcaagaactggctggacgacctgctgcgcgaggccaaggccgccggcgagaactgc
gaggtgcagcccgaaggctgctcgatccaggccgaagccgagtacaccacgatcctcgat
ccggccgagttcgatgcctggctcgagcgcctgaagaacgccgagtgcttcgccttcgat
accgaaaccaccagcatcgatgctcagcgcgccgagctggtcggcgtgtcgttcgccgtc
gagccgggccaggcggcctacgtgccgctgcgtcattcctatatgggtgtgccgcagcag
ctcgagcttgatgccgtgcttggcgcgctcaagccgctgctggaggatccggcgaagacc
aagatctgccagcacggcaaatacgacatgaacgtgctgatgcactacggcatcgagatg
cgcggcatgaccttcgacaccatgctcgaatcctacgtgctggacgccaccgccactcgc
cacgacatggatagcctggcgctgaagtacctcggccgtggcaccatccgcttcgaggac
atcgccggcaagggcgccaagcagctgaccttcgaccagatcgccatcgagcaggcgggg
ccctacgctgccgaggacgccgatgtcaccctgcgcctgcaccagaccctgctcggcaag
ctggagcagacgccatcgctgctcaaggtgctgaccgagatcgagatgccgctggtgccg
gtgctggcgcgcatcgagcgcaacggtgcgctggtcgatgcgcagctgctcggccagcag
agcgtcgagctgggcgacaaactggtgcagctggaacgcgaggccttcgatattgccggc
gaggagttcaacctcggctcgcccaagcagctctgcgcgatcctctatgacaagctcggc
tgcccggtaatctccaagaccgccggcggccagccgtccaccgcggaaagcgtgctggcc
gaactggccgagcaggattacccgctgcccaaggtgatcatgcagcaccgctccttgagc
aagctcaagggcacctacaccgacaagctgccgcagcagatcaacccgcgcaccgggcgc
atccacaccagctaccaccaggcggtgaccgccaccggccggctgtcctccagcgacccg
aacctgcagaacatcccgatccgcaccgctgagggccggcgtattcgccaggccttcatc
gcggcgccgggctacaagctgctcgcggccgactactcgcagatcgagctgcgcatcatg
gctcatctggcgcaggatgccggtctgctgcacgctttccagaacgacctcgacgtgcac
cgcgccaccgctgccgaggtgttcggcgtgccgctggagcaggtcagcaacgaccagcga
cgcagcgccaaggcgatcaacttcggcctgatctacggcatgagcgctttcggcctggcc
aagcagatcgacgtcggccgcaaggaagcgcaggagtacatcgaccgttatttcgcccgt
taccccggcgtgctggcctacatggagcgcacccgcacccaggccgccgagcagggctat
gtcgagacgctgttcggtcggcggctgtacctgccggagatcaattcgaagaacggcgcc
atgcgcaagggcgccgagcgcaccgcgatcaacgcgccgatgcagggcaccgcagcggac
atcatcaagcgcgccatgatcgctgtggacggctggctgcaggacagtgggctggatgcg
agggtgatcctgcaggtccacgatgaattggtgctggaagtgcgcgaagacctggtcgag
ccggtccgccagcagatctgtccgttgatgagcgaggcggcccagctggacgtaccgctg
ctggtcgaagcgggcgttggcaacaactgggacgaggcgcactga

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