Stutzerimonas kunmingensis: LW136_22000
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Entry
LW136_22000 CDS
T08242
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pkg
Stutzerimonas kunmingensis
Pathway
pkg00521
Streptomycin biosynthesis
pkg00523
Polyketide sugar unit biosynthesis
pkg00525
Acarbose and validamycin biosynthesis
pkg00541
Biosynthesis of various nucleotide sugars
pkg01100
Metabolic pathways
pkg01110
Biosynthesis of secondary metabolites
pkg01250
Biosynthesis of nucleotide sugars
Module
pkg_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LW136_22000 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LW136_22000 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LW136_22000 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LW136_22000 (rfbB)
00525 Acarbose and validamycin biosynthesis
LW136_22000 (rfbB)
Enzymes [BR:
pkg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LW136_22000 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
NAD_binding_10
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
UIP32749
LinkDB
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Position
4610608..4611678
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AA seq
356 aa
AA seq
DB search
MRILVTGGAGFIGSALIRHLILDTEHSVLNLDKLTYAGNLESLAAVEDNPRYQFLQADIA
DRERVSEALLEFQPDAIMHLAAESHVDRSIDGPAEFIQTNIVGTYQLLEATRAYWQSLPV
ERREAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLP
VLITNCSNNYGPYHFPEKLIPLVILNALDGKPLPVYGDGSQIRDWLFVEDHARALFKVVS
EGVVGETYNIGGHNEQKNIEVVRGICALLEELAPSKPAGLARYEDLITFVKDRPGHDLRY
AIDASKIERELGWVPQETFQTGLRKTVQWYLENLEWCRRVQDGSYQRERLGALENA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctcgttactggcggagccggattcatcggctccgcactgatccgccatctc
attctcgataccgagcacagcgtgctcaacctggacaaactgacctatgccggcaacctg
gagtcgctggcagccgtggaagacaacccgcgctatcagttcctccaggccgacatcgcc
gatcgtgagcgggtcagcgaggcgctgctggagttccagccggacgccatcatgcatctg
gccgccgagtcccacgtcgaccgctccatcgacggcccggccgaattcatccagaccaac
atcgtcggcacctatcagctgctcgaggccacccgcgcctactggcagagcctgccggtc
gagcgtcgcgaggccttccgcttccaccacatctccaccgacgaggtctacggcgacctg
catggcgtcgacgacctgttcaccgagaccacaccctacgcgcccagctcgccctactcg
gccagcaaggcctcgtcggatcacctggtgcgcgcctggcagcgtacctacgggctgccg
gtgctgatcaccaactgctcgaacaactatggcccgtatcacttccccgagaagctgatc
ccactggtcatcctcaatgccctcgatggcaagccgctgccggtctatggcgatggctcg
cagatccgcgactggctgttcgtcgaagaccacgcccgcgcgctgttcaaggtggttagc
gaaggtgtggtcggcgaaacctacaacatcggcggccacaacgagcagaagaacatcgag
gtggtgcgcggtatctgcgcactgctggaagagctggcgccgagcaagcctgccgggctt
gcgcgctatgaagacctgatcaccttcgtcaaggatcgcccgggccacgacctgcgctac
gccatcgacgccagcaagatcgagcgcgagctcggctgggtgccgcaggaaaccttccag
accggcctgcgcaagaccgtgcagtggtacctggaaaacctcgaatggtgccgtcgcgtt
caggacggcagctatcaacgcgagcgccttggcgccctggagaacgcatga
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