Ectopseudomonas khazarica: JLK41_00615
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Entry
JLK41_00615 CDS
T07269
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pkh
Ectopseudomonas khazarica
Pathway
pkh03030
DNA replication
pkh03410
Base excision repair
pkh03420
Nucleotide excision repair
pkh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JLK41_00615 (polA)
03410 Base excision repair
JLK41_00615 (polA)
03420 Nucleotide excision repair
JLK41_00615 (polA)
03440 Homologous recombination
JLK41_00615 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkh03032
]
JLK41_00615 (polA)
03400 DNA repair and recombination proteins [BR:
pkh03400
]
JLK41_00615 (polA)
Enzymes [BR:
pkh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JLK41_00615 (polA)
DNA replication proteins [BR:
pkh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JLK41_00615 (polA)
DNA repair and recombination proteins [BR:
pkh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JLK41_00615 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JLK41_00615 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QTS86697
LinkDB
All DBs
Position
123921..126716
Genome browser
AA seq
931 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPNSPFAVVFD
AKGGTFRDELFAEYKANRPSMPDELRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLAR
QAAGEQRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDEGGVKEKFGVGPELIIDYLALM
GDKVDNIPGVPGVGEKTALGLLVGIGGGLDVLYANLDKVPALPIRGAKGLPAKLEEHREM
AYLSYQLATIKTDVPLNIAIDDLHPGEPDQAALVELYGELEFKNWLDDLLRQNKGLAAKA
AAPAGDLFAEPVAGAAEALAEPAPASSGDYQLVLEQAQFDAWLKKLEQAELIAFDSETTS
VDAQQAQLVGLSFAVKAGEAAYVPLAHSYMGVPQQLDRDAVLKALQPILEDPAKAKVGQH
AKYDINVLANASTPIAVQGVAFDTMLESYVLDSTATRHDMDSLALKYLNHSTIRFEDIAG
KGAKQLTFDQIPLEQAGPYAAEDADVTLRLHQELWGRLEAVPSLARVLREIEIPLVPVLA
RIERNGALVDARLLGQQSVELGEKLVELERKAFEIAGEEFNLASPKQLGVILYEKLGYPV
ISKTAKGQPSTAEAVLAELAEQDFELPKVLMQYRSLSKLKSTYTDRLPEQINPRTGRIHT
SYHQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYRTMAADYSQIELRIMAHL
AKDEGLLEAFRNDLDVHKATAAEVFGVALDEVSSDQRRKAKAINFGLIYGMSAFGLAKQI
DVERKEAQAYIDRYFARYPGVLSYMERTRAQAAEQGYVETVFGRRLYLPEIHAQNQAMRK
GAERAAINAPMQGTAADIIKRAMIKVDGWLQDSGVDARIIMQVHDELVLEVREDLVDEVG
AKLQSLMGDAADLDVPLLVEVGVGANWDEAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagctcccctcgttctggtcgacggttcctcgtacctgtaccgcgctttccac
gccctgcccccgctgaccacgtccaagggcatgcccaccggggcggtcaagggcgtgttg
aacatgctcaagagcctgcgcaagcaatacccgaacagtccgttcgccgtggtcttcgac
gccaagggcggcaccttccgcgatgagctgttcgccgagtacaaggccaatcgtccatcg
atgccggacgagctgcgtgtccaggtcgagccgctgcatgccagcgtgcgtgccctgggc
ctgcccctgctgtgcgtcgagggcgtggaagccgacgacgtgatcggcaccctggcccgg
caggcagccggtgaacagcgcgacgtggtgatctctaccggcgacaaggacatggcgcaa
ctggtctgcccgcacgttacgctggtcaacaccatgaccggaagcgtctatgacgaaggt
ggcgtaaaggagaaattcggtgtcggtcccgagctgatcatcgattacctggccctgatg
ggcgacaaggtggacaacattcccggcgtacccggggtcggcgagaaaaccgcgctcggc
ctgctggtcggcatcggtggtggtctcgacgtgctctacgccaatctcgacaaggtgccg
gcgctgccgattcgcggcgccaagggcctgccggccaagctcgaggaacaccgcgagatg
gcctacctctcctatcagctggcgaccatcaagaccgacgtgccgctgaacatcgccatc
gatgacctgcatccgggcgagccggatcaggcggcgctggtcgagctgtatggcgaactg
gaattcaagaactggctggacgacctgctgcgccagaacaagggcctggcggccaaggcc
gctgcgcctgccggtgatctgttcgccgagccggtcgctggcgctgccgaggcgcttgcc
gaacccgcgccggcgagcagcggggattaccagctggtgctggagcaggcgcagttcgat
gcctggctgaagaagctggagcaggccgagctgatcgccttcgacagcgaaaccaccagc
gtcgatgcccagcaggcgcaactggttggcctgtccttcgcggtcaaggccggcgaggcc
gcctacgtgccgctggcccacagctacatgggcgtgccgcagcagctcgaccgcgatgcc
gtgctcaaggcgctgcagccgatcctcgaagacccggccaaggccaaggtcggccagcat
gccaagtacgacatcaatgtcctggccaatgccagcacgccgatcgcggtgcagggcgtg
gccttcgacaccatgctcgaatcctacgtgctggactccaccgccacccgtcacgacatg
gacagcctggcgctgaagtacctgaaccacagcaccatccgcttcgaggacatcgccggc
aagggggccaagcagctgaccttcgaccagattccgctggagcaggccgggccttacgcc
gccgaggacgccgacgtgaccttgcgtctgcaccaggaactctggggccgcctcgaggcc
gtaccgtcactggccagggtgctgcgggagatcgagatcccgctggtgccggtgctggcg
cgcatcgagcgcaacggtgcgctggtcgatgccaggctgctcggtcagcagagcgtcgaa
ctgggcgagaaactggtggaactggagcgcaaggccttcgagatcgccggcgaggagttc
aacctggcttcgcccaagcagctcggggtgatcctctacgagaagctcggttacccggtg
atcagcaagaccgccaagggccagccgtccaccgccgaggcggtgctcgccgagctggcc
gagcaggacttcgaactacccaaggtgctgatgcagtaccgctccctgagcaagctcaag
agcacctacaccgacaggttgccggagcagatcaacccgcgtaccgggcgcatccatacc
agctaccaccaggcggtggcggcgaccgggcgcctgtcctcgagtgacccgaacctgcag
aacatcccgatccgtaccgccgaagggcggcggatccgccaggcgttcgtcgcccccaag
ggctaccgcacgatggcggcggactactcgcagatcgagttgcgcatcatggcccacctg
gccaaggacgaaggcctgctggaggccttccgcaatgacctggacgtgcacaaggccacc
gcggccgaggtgttcggcgtggcgctggacgaggtcagcagcgatcagcggcgcaaggcc
aaggccatcaacttcggtcttatctatggcatgagtgccttcggcctggccaagcagatc
gacgtcgagcgcaaggaggcccaggcctacatcgaccgttacttcgcccgttatcccggc
gtgctcagctacatggagcgcacccgtgcgcaggcggccgagcagggctacgtggagacc
gtgttcggccggcgtctgtacctgccggagatccacgcgcagaaccaggccatgcgcaag
ggggccgagcgggcggcgatcaacgcgcccatgcagggcacggcggcggacatcatcaag
cgcgcgatgatcaaggtggacggctggttgcaggacagcggcgtggatgcgcgaatcatc
atgcaggtccacgacgaactggtgctggaggtgcgcgaggacctggtcgacgaggtcggt
gccaagcttcagagcctgatgggggacgccgccgacctggatgtgccgttgctggtcgaa
gtgggtgtcggtgccaactgggatgaagcgcattga
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