Ectopseudomonas khazarica: JLK41_00940
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Entry
JLK41_00940 CDS
T07269
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
pkh
Ectopseudomonas khazarica
Pathway
pkh02010
ABC transporters
pkh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pkh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JLK41_00940
03070 Bacterial secretion system
JLK41_00940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkh02000
]
JLK41_00940
02044 Secretion system [BR:
pkh02044
]
JLK41_00940
Transporters [BR:
pkh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JLK41_00940
Secretion system [BR:
pkh02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JLK41_00940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
AAA_22
AAA_29
AAA_18
AAA_30
PRK
MeaB
DUF87
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QTS86757
LinkDB
All DBs
Position
complement(196670..198811)
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AA seq
713 aa
AA seq
DB search
MQTTDGQGTDSGLACLVMLARFHNVAASPEQLAHEFAEDGRAFGRAELLLAAKKLGLKAK
SARSAIERLPHVPLPAIAADQDGRFFIIARIDEGKRQVLIHDPQAQRPEVLSFEQLQARW
AGELILIRSEASLAGELSRFDFTWFIPAIVKYRKLLGEVLLVSFVLQIFALLTPLFFQVV
MDKVLVHRGLSTLDVIAIGLLGIMIFETLLSGLRSYVFAHTASRIDVELGSKLFRHLVTL
PLAYFQARRVGDSVARVRELENIRSFLTGNAITLILDVLFSVVFIAVMFYYSGWLTLVVI
LSLPLYFLVSLLITPVLRARLNESFSRGAENQAFLVETVNGIDTLKAMAVEPQINRKWDN
QLAGYVAASFKTQNLSMLANESVGFIGKLVTVATLWLGARLVIEGDLTVGQLIAFNMLAG
RVSQPIMRLAQLWTNFQQTGVSVQRLGDILNTRTELSQATRSALPPLKGQIEFDQVHFRY
RPDGSEILRGISLHIQAGDVIGVVGRSGSGKSTLTRLLQRLYTPERGRVLVDGMDLALAD
VSSLRRQIGVVLQDNMLFARSIRENIALTDPGAPIEQVMQAAKMAGAHEFILELSEGYDT
VVGEHGASLSGGQRQRIAIARALMGNPRILIFDEATSALDYESERIIQQNMQAICKGRTV
IIIAHRLSAVRDANRILVMDRGQIVEQGSHAELLTHQAGHYSRLHRLQQGGAA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaaccgacggtcagggaactgacagtggcctcgcctgcctggtcatgctggca
cgcttccacaatgtagcggcctccccggagcagcttgctcatgaattcgccgaagatggc
cgtgctttcggtcgtgccgagttgctgctggcggcgaagaagctcggcctcaaggccaag
tccgcacgcagtgccatcgagcgcctgccgcatgtcccgttgcctgcaatcgcggctgat
caggatggccgcttcttcatcatcgcccgtatcgatgaaggcaagcgccaggttctgatt
cacgatccgcaggcgcagcgccccgaggtcctttcgttcgaacagttgcaggcgcgctgg
gcgggcgagctgatcctgattcgctccgaagcctcactggcgggcgagctgtcgcgtttc
gacttcacgtggttcatccccgccatcgtcaagtaccgcaaactgctgggcgaagtgctg
ctggtgtcgttcgtgctgcagatcttcgcgctgctcacgccgctgttctttcaggtggtg
atggacaaggtgctggtgcaccgtggcctgtcgaccctggatgtgatcgccatcggcctg
ctcggcatcatgatcttcgagactctgctgtcgggcttgcgcagctatgtgttcgcgcat
accgcgagccgcatcgacgtggagctggggtcgaagctgttccgccatctggtgaccctg
ccgctggcgtatttccaggcccgtcgggtgggggattcggtggcgcgggtgcgtgaactg
gagaacatccgcagctttctcaccggcaatgccatcacgctgatcctcgacgtgctgttc
tccgtggtgttcatcgcggtgatgttctactacagcggctggctgacgctggtggtgatt
ctgtcgctgccgctgtatttcctggtgtctctgctgatcaccccggtcctgcgcgcgcgc
ctcaacgagagtttctcccggggcgcggagaaccaggcctttctggtggagacggtcaac
ggcatcgataccctcaaggccatggcggtggaaccgcagatcaaccgcaagtgggacaac
cagctcgcgggctacgtagctgcgagtttcaagacgcagaacctttccatgctggccaat
gaaagtgttggtttcatcggcaagctggtcaccgtggccaccctctggctgggcgcgcgc
ctggtgatcgagggcgacctgacggtcggccagttgatcgctttcaacatgctggccggg
cgggtctcacagccgatcatgcgcctggcccagctgtggaccaacttccagcagaccggc
gtctcggtgcagcgcctgggcgatatcctcaatacccgcaccgagctgtcccaggccacc
cgtagcgcgctgccaccgctgaaagggcagatcgagttcgatcaggtgcacttccgctat
cgcccggatggctcggagattctgcgcggcatcagcttgcacattcaggctggcgacgtg
atcggcgtggtcggtcgctccggctcgggcaagagcaccctgactcgcctgctgcagcgc
ctctatacgccggaacgcggccgggtgctggtcgacggcatggacctggccctggccgat
gtctcttccctgcgccgacagatcggtgtggtgctgcaggacaacatgctgttcgcccgc
agcatccgcgagaacattgcgctgaccgatcccggcgcgccgatcgagcaggtgatgcag
gcggcgaagatggccggcgcccatgagttcatcctggagctgtcggagggctacgacacc
gtggtcggtgaacacggcgcctcgctgtccggggggcaacgccaacgtatcgccattgcc
cgcgcactgatgggcaacccgcgcatcctgatcttcgacgaggccaccagcgccctggac
tacgagtccgaacgcatcatccagcagaacatgcaggccatctgcaagggccgcacggtg
atcatcatcgctcaccgcctgagcgcggtgcgcgacgccaaccgcatcctggtgatggat
cgcgggcagatcgtcgagcagggcagccatgccgaactgctcacccaccaggccggccac
tattcccgtctgcaccgcctgcagcaaggcggtgccgcatga
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